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SCNpilot_expt_500_bf_scaffold_792_13

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(17417..18817)

Top 3 Functional Annotations

Value Algorithm Source
NodT family RND efflux system outer membrane lipoprotein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USL2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 470.0
  • Bit_score: 524
  • Evalue 1.20e-145
RND transporter {ECO:0000313|EMBL:AJP71755.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 466.0
  • Bit_score: 647
  • Evalue 1.30e-182
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 462.0
  • Bit_score: 442
  • Evalue 1.40e-121

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGAAGCGGACCCTGACCCTGATCGCCGCCGGCCTGACGCTGTCGGGCTGCGTGGTCGGCCCCAATTATGTCTCGCCTGCCCCCAAGGCGCCCGCCCAGGGCGACCTGAGCCAGGCGAGCGCGCCGGGCTTCGTCGCGGACGAGCCGCCGGCGGACTGGTGGAAGCTGTTCGACACGCCGGTGATCGACCGGCTGGTCGGCGAGGCGCTGGCCGCCAATACCGACCTGCGGGTCGCGGCGGCGAACCTGCGCCAGGCGCGGGCGAGCCTGCGCGAGACGCGGGCCCAGCGGCTGCCGACCACCAACGTCACGTCCAAGGCGACGCATGCCCGCGTTCCGGGCGCGTCGCTGGGCATCCCCGGTTCTTCGTTCGAAGGCGATACCTATGACGTCGGGCTCGACCTGAGCTATCAGGTCGATCTGTTCGGGAAGATCACCCGCGCGATCCAGGCCGGCCGTGCCGACCTGCAGGCGAGCGAGGCCGCTTACGACCTCGCCCGCGTCACCGTGGTGGCCGAGACGATCCGTGCCTATTCGGATGCCTGTGCCGCCGGCGAGCAGCTCAAGGTCGCTTCGCAGACGCTCAAGCTCCAGGAAGACACGTTCGACCTGACGCGCCGGCTCGAGGCGGGCGGGCGCGGCACCGGGCTGGAGACCAGCCAGGGCGCCGCGCTGCTGGAGCAGACCCGGGCGCAGGTCCCGGTCTATGCGGCGCAGCGCAAGGCCGCGCTCTTCCGGCTCGCCGTGCTGACCGGCAAGCCGCCGGCCGAGGCGCCCGCCGACGTGGCGAGCTGCGAGACGGTGCCGGTCGTGAAGCAGGCCATCCCGGTCGGCAATGGTGCGACGCTGCTCGCCCGCCGCGCCGATGTCCGCGCGGCCGAGCGCCGGCTCGCCGCCGCGTCGGCGCGGATCGGCGTCGCCACGGCGGACCTTTATCCGAACATCTCGATCGGCGGCTCGATCGGCTCGACCGCGCTGGCGCCCAAGGACATGTTCAACAGCTCAAGCTTCCGCTTCAGCGTCGGGCCGCTGCTGTCGTTCAGCTTCCCGAACATGAGCGTCGCCCGGGCCCGCATCGCCCAGGCCGAGGCGGGAGCGGATGCCGCGCTCGCCACGTTCGACGGCACCTGGCTGACCGCGCTGCGGGATACCGAGACCGCGCTGGCTACCTATGTGGCGCAGGGCCAGCGCGTCGAGGCGCTGCGGCGGGGCCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGCCGGCGCGGAACCGTTCCAGACCGTGCTCGATGCCGAGCGTTCGCTCGCCACGAACGAGCTGAGCCTGGCCCAGGCCGAATCGGACTTCTCCGACGCGACGGTTACCCTCTTCCTCGCGCTTGGCGGAGGTTGGCAGCAGTCTCCCCAGGGCTGA
PROTEIN sequence
Length: 467
MKRTLTLIAAGLTLSGCVVGPNYVSPAPKAPAQGDLSQASAPGFVADEPPADWWKLFDTPVIDRLVGEALAANTDLRVAAANLRQARASLRETRAQRLPTTNVTSKATHARVPGASLGIPGSSFEGDTYDVGLDLSYQVDLFGKITRAIQAGRADLQASEAAYDLARVTVVAETIRAYSDACAAGEQLKVASQTLKLQEDTFDLTRRLEAGGRGTGLETSQGAALLEQTRAQVPVYAAQRKAALFRLAVLTGKPPAEAPADVASCETVPVVKQAIPVGNGATLLARRADVRAAERRLAAASARIGVATADLYPNISIGGSIGSTALAPKDMFNSSSFRFSVGPLLSFSFPNMSVARARIAQAEAGADAALATFDGTWLTALRDTETALATYVAQGQRVEALRRGRXXXXXXXXXRAGAEPFQTVLDAERSLATNELSLAQAESDFSDATVTLFLALGGGWQQSPQG*