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SCNpilot_expt_500_bf_scaffold_792_16

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(22207..23256)

Top 3 Functional Annotations

Value Algorithm Source
Putative efflux pump periplasmic linker protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCW1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 347.0
  • Bit_score: 412
  • Evalue 4.90e-112
Uncharacterized protein {ECO:0000313|EMBL:AJP71753.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 337.0
  • Bit_score: 491
  • Evalue 8.90e-136
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 351.0
  • Bit_score: 342
  • Evalue 1.50e-91

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGCATTCGAAGAACCGCCAGCTGCTTATCCCGGCTCTCATGGCCGCGCTCGCTCTCGCCGGTTGCGGCGGCGGCGGACCGCAGATGCCGCAGCAGGGGCCGCCCCCCGTCACCGTCTCGGCACCGCTGGTGCAGGACGTGGTCGACTGGGACGAGTTCGTCGGCCGCTTCGAGGCGATCCAGACCGTCGAGGTGCGCCCGCGCGCCTCGGGCTATCTGCAGGGCATATGGTTCAAGGACGGCCAGTTCGTCCGCAAGGGCCAGCTGCTCTTCACCATCGATGCGCGCCCGGCCCAGGCCGCCGTCGCCCAGGCTGCCGCGCAGGTTGCCCAGGCCAAGGCGACGCTCGCCAATGCGCAGACCGAATATGCCCGTTCCGAGGCGCTGGTCGCCCAGCGTGCCGCCAGCCAGGAAGAGCTGGAGCAGCGCCGCGCCGCGCTGCGCTCGGGCGCCGCGCAGGTCGCCGCCGCGGAGGCCAATCTGCGTGCGCGCCAGCTCGACCTCGGCTTCACGCGCGTCGTCGCGCCGCTGAGCGGCCGCATCTCGGAGCGCAAGGTCGATGTGGGCAATTCGGTCACTGCCGACCAGACGGTGCTGACCACCATCGTCTCGGTCGATCCGCTGCACTTCGTCTTCCAGGGTTCGGAAGCGCTGCTGCTGAAATATCAGCGCCAGGGCACCGGCGCCCAGAACGGCACGGCGATCAAGGTCAAGCTTTCCGACGAGAGCGACTATACGCATACGGGCGCGCTCGACTTCGTCGACAACGCGCTCGATGCCGGTGCAGGCACGATCCGCGCCCGCGCGATCATCGCCAATCCGGGCGGCTTCCTGAAGCCCGGCATGTTCGGCTCGGCCCGGCTCGAGGCGTCCAAGCCCTATCCGGCGCTGCTGGTGCCGGACACGGCGGTGATGGCCGATGCGGCGCGCCAGATCGTGTTCGTCGTCGACAAGAGCAACACGGTGACGGCGCGTCCGGTGCAGACCGGCCCGCTGCGCGGCAATCTGCGCGTGATCCGCTCGGGCCTGACCAGGGACGACCGGTGGTGA
PROTEIN sequence
Length: 350
MHSKNRQLLIPALMAALALAGCGGGGPQMPQQGPPPVTVSAPLVQDVVDWDEFVGRFEAIQTVEVRPRASGYLQGIWFKDGQFVRKGQLLFTIDARPAQAAVAQAAAQVAQAKATLANAQTEYARSEALVAQRAASQEELEQRRAALRSGAAQVAAAEANLRARQLDLGFTRVVAPLSGRISERKVDVGNSVTADQTVLTTIVSVDPLHFVFQGSEALLLKYQRQGTGAQNGTAIKVKLSDESDYTHTGALDFVDNALDAGAGTIRARAIIANPGGFLKPGMFGSARLEASKPYPALLVPDTAVMADAARQIVFVVDKSNTVTARPVQTGPLRGNLRVIRSGLTRDDRW*