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SCNpilot_expt_500_bf_scaffold_1548_24

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(16159..18699)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 849.0
  • Bit_score: 1549
  • Evalue 0.0
DNA topoisomerase I subunit omega (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 848.0
  • Bit_score: 1354
  • Evalue 0.0
  • rbh
DNA topoisomerase I n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F4FFC8 similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 844.0
  • Bit_score: 1527
  • Evalue 0.0
  • rbh

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2541
ATGCAGCTCGTCATCGTAGAATCGCCGGCCAAGGCGAAGACCATCGAGAAATATCTCGGCAAGGACTATCGGGTCCTCGCCTCCTACGGCCATGTCCGCGACTTGCCTGCGCGCGACGGCTCCGTCGACCCGGACGAAGGGTTCGCGATGGAATGGGAGACCTATGCCGACAAGTCGAAGCAGCTGAAGGCGATCGCCGACGAAGCGAAGAAGGCCGACCGGCTGATCCTCGCGACCGACCCCGATCGCGAGGGCGAGGCGATCAGCTGGCACGTGCAGGAAGTGCTCCGGAACAAGAAGGCGCTGCCCAGGGAAGTCGAGCGCGTCACCTTCAACGCGATCACCAAGCCGGCGATCCTGACCGCGATGGCGCAGCCGCGCGAGCTGGATACCGACCTGATCGATGCCTATCGCGCGCGCCGCGCGCTCGACTATCTGGTGGGCTTCACCTTGTCGCCGGTGCTGTGGCGCAAGCTGCCCGGCGCCAAGTCGGCCGGCCGCGTCCAGTCGGTGGCGCTGCGCCTGATCGTCGAGCGCGAGCGCGAGATCGAGGGGTTCAAGGCCCAGGAATATTGGTCGGTCACCGCCGACATGGAGCAGGACGGCACGCCGTTCACCAGCCGCCTGGTCAAGTGGAAGGGCGACAAGCTCGACCGGCTGTCGATCGGCGACGGCAAGACTGCCGAGGCAGCGAAGAAGTCGGTCGAGGAAGGCCGCTTCACCGTCGTCTCGGTCGAGACCAAGCCGGCGATGCGCAACCCGCCGCCGCCCTTCACCACCTCGACGCTGCAGCAGGAAGCCGCGCGCAAGCTGGGCTTCTCGGCCAGCCACACGATGCGGATCGCCCAAGGTTTGTACGAAGATGGCGCGATCACCTATATGCGTACCGACGGCGTCCAGATGGACCCCGGCGCCATCCAGGAGGCCCGCAAGGCAGTCGCCACCCGCTATGACGGCAGCTATGTGCCGGACAAGCCGCGCGTCTACACCACCAAGGCCAAGAACGCCCAGGAAGCGCACGAAGCGATCCGCCCCACCGATTTCAGCAAGGATCGCGCAGGCTCGGGCGATCACGCCAGGCTCTACGAACTGATCTGGAAGCGTGCGCTGGCCAGCCAGATGGCCTCGGCCCGGATGGAGCGCACCACGATCGACCTGGAGGACGCGACCGGCCAGCACGGGCTGCGCGCCACTGGCCAGGTGGTGCTCTTCCCCGGCTATCTCGCGCTCTACGAGGAAGGCCGCGACGATGAAGGCGACGAGGATTCGCGCCGCCTGCCGCGGATGAGCGAGGGCGCGACTCCGGCCAAGAAGGCCGTCCATGCCGAGCAGCATTTCACCCAGCCGCCGCCCCGCTTCTCCGAAGCCTCGCTGGTCAAGCGGCTGGAAGAGCTGGGGATCGGCCGCCCGTCGACCTATGCCTCGATCATCCAGGTGCTCAAGGATCGTGCCTATGTGCGCGTCGAGAAGAACCGCTTCTTCGCCGAGGAGAGCGGGCGGCTGCTGACGGCGTTCCTCGAGCGCTTCTTCCAGAAATACGTCAACTACGACTTCACCGCCGAGCTGGAGGAGGAGCTCGACGACGTCTCGGGCGGCCGCGCCCAGTGGCAGGCGGTGCTCGAAGCCTTCTGGAAGGACTTCAAGCCGCGCACGGCCGATGTGATGGAGCAGAAGCCGTCGGACATCACGGCGGCGCTGGACGAGTTCCTGGCGCCCTATCTGTTCCCGGAAAGGGCGGACGGCAGCGATCCGCGGCTGTGCCCGAACTGCGGCAACGGCCGGCTGGCGCTGCGCGGCGGCAAGTTCGGCGCGTTCATCGCCTGCTCCAACTATCCCGAATGCAAATATACCCGCCGCTTCGCGCAGCCCGGCGGGGAAGCGGGCGAGGACAGCGGGCCGGAAGTGCTCGGCCAGGATCCGGAAACGGGCCTCAACGTCGAGCGCAAGTCGGGCCGGTTCGGGCCGTACATACAGCTTGGCGAGGGCAAGGAAGCGGCACGCGCCTCGATCCCCAAGGACGTCGAGCTCGACCTGGAGCTGGCGCTGAAGCTGCTCAAGCTGCCGCGCGTGATCGGCGACCATCCGGAGACCGGCAACCCGATCACCGCCTCGATCGGCCGCTACGGGCCGTATCTGGCGCATGACGGCAAATATGCGCGGCTCGGCTCGACCATGGAAGTGTTCGAGACCGGCATGAACGCCGCGGTGGTCAAGCTGGCCGAAGCGGCGGCGAATTCGGGCCGCCCGGCCCGGGGCGCCGCGCGCGAGCCCCTGAAGGTACTCGGCAAGCATCCGCGCACCGAGGCCGAGATCAAGCTGATGGACGGCCGCTACGGCGCCTATGTCACCGACGGCGAGACCAACGCCACGCTGCCCAAGTCGATCGACAAGGACCAGCTGACGCTCGAGGAAGCCGCCCAGCTGATCGACGCCCGCGCGGCGGCGGGCCCCGCCAAGGGCAAGGGCAAGAAGAAGGCCCCGGCCAAGAAGGCGCCCGCCAAGAAGGCGGCGCCCAAAAAGGCCGCGGCGAAGGCGGGATGA
PROTEIN sequence
Length: 847
MQLVIVESPAKAKTIEKYLGKDYRVLASYGHVRDLPARDGSVDPDEGFAMEWETYADKSKQLKAIADEAKKADRLILATDPDREGEAISWHVQEVLRNKKALPREVERVTFNAITKPAILTAMAQPRELDTDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLIVEREREIEGFKAQEYWSVTADMEQDGTPFTSRLVKWKGDKLDRLSIGDGKTAEAAKKSVEEGRFTVVSVETKPAMRNPPPPFTTSTLQQEAARKLGFSASHTMRIAQGLYEDGAITYMRTDGVQMDPGAIQEARKAVATRYDGSYVPDKPRVYTTKAKNAQEAHEAIRPTDFSKDRAGSGDHARLYELIWKRALASQMASARMERTTIDLEDATGQHGLRATGQVVLFPGYLALYEEGRDDEGDEDSRRLPRMSEGATPAKKAVHAEQHFTQPPPRFSEASLVKRLEELGIGRPSTYASIIQVLKDRAYVRVEKNRFFAEESGRLLTAFLERFFQKYVNYDFTAELEEELDDVSGGRAQWQAVLEAFWKDFKPRTADVMEQKPSDITAALDEFLAPYLFPERADGSDPRLCPNCGNGRLALRGGKFGAFIACSNYPECKYTRRFAQPGGEAGEDSGPEVLGQDPETGLNVERKSGRFGPYIQLGEGKEAARASIPKDVELDLELALKLLKLPRVIGDHPETGNPITASIGRYGPYLAHDGKYARLGSTMEVFETGMNAAVVKLAEAAANSGRPARGAAREPLKVLGKHPRTEAEIKLMDGRYGAYVTDGETNATLPKSIDKDQLTLEEAAQLIDARAAAGPAKGKGKKKAPAKKAPAKKAAPKKAAAKAG*