name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_1548_1 |
Not on your lists |
comp(1..735)
|
adenosylmethionine-8-amino-7-oxononanoate aminotransferase; K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
Aminotransferase class-III n=1 Tax=uncultured organism RepID=T1WCC2_9ZZZZ
Aminotransferase class-III {ECO:0000313|EMBL:AGU11790.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
|
|
SCNpilot_expt_500_bf_scaffold_1548_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(732..1343)
|
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
dithiobiotin synthetase n=1 Tax=Sphingomonas elodea RepID=UPI0002630681
|
|
SCNpilot_expt_500_bf_scaffold_1548_3 |
Not on your lists |
comp(1340..2470)
|
Aminotransferase class I and II n=1 Tax=uncultured organism RepID=T1WAE0_9ZZZZ
rbh
Aminotransferase class I and II {ECO:0000313|EMBL:AGU11788.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
|
|
SCNpilot_expt_500_bf_scaffold_1548_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2520..2948)
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IUJ0_RHOP2
Uncharacterized protein {ECO:0000313|EMBL:KIZ47288.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1548_5
unknown
|
Not on your lists |
3114..3761
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_1548_6
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3821..4933
|
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
adh; Zn-dependent alcohol dehydrogenase (EC:1.1.1.1); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
rbh
Alcohol dehydrogenase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0II48_9SPHN
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1548_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4944..5327
|
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D602_SPHYA
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:KEZ18145.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
glyoxalase family protein
|
|
SCNpilot_expt_500_bf_scaffold_1548_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5324..6487
|
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
formyltetrahydrofolate deformylase (EC:3.5.1.10); K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]
rbh
formyltetrahydrofolate deformylase n=2 Tax=Sphingomonas melonis RepID=UPI00036E95FD
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1548_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6498..7331
|
Carboxylesterase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IK62_9SPHN
S-formylglutathione hydrolase {ECO:0000313|EMBL:AJP73883.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_500_bf_scaffold_1548_10
Sphingobium jiangsuense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7328..8545
|
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024893DE
Reductase {ECO:0000313|EMBL:AHZ46830.1}; TaxID=870476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jiangsuense.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
|
|
SCNpilot_expt_500_bf_scaffold_1548_11
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8649..8861
|
Cro/Cl family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC5E2
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KEO87138.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
XRE family transcriptional regulator; K07729 putative transcriptional regulator
|
|
SCNpilot_expt_500_bf_scaffold_1548_12
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8833..9267
|
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002EFF877
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
|
|
SCNpilot_expt_500_bf_scaffold_1548_13
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9295..10218
|
conjugative transfer protein GumN n=1 Tax=Sphingomonas elodea RepID=UPI0002631675
rbh
GumN family protein {ECO:0000313|EMBL:EZP52676.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
GumN protein; K09973 hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1548_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10296..10763
|
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631676
Uncharacterized protein {ECO:0000313|EMBL:AJP73882.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_500_bf_scaffold_1548_15
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10765..11007)
|
exonuclease RNase T and DNA polymerase III; K10857 exodeoxyribonuclease X [EC:3.1.11.-]
exonuclease n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030C0AF4
Exodeoxyribonuclease X {ECO:0000313|EMBL:GAM00426.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
|
|
SCNpilot_expt_500_bf_scaffold_1548_16
unknown
|
Not on your lists |
comp(11001..11576)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_1548_17
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11524..11904)
|
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI0003816D2B
Uncharacterized protein {ECO:0000313|EMBL:KKC38307.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1548_18
Sphingomonas sp. S7, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11904..13292)
|
Phosphoglucomutase n=1 Tax=Sphingomonas sp. S7 RepID=Q9RA87_9SPHN
rbh
Phosphoglucomutase {ECO:0000313|EMBL:AAF19992.1}; TaxID=110918 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. S7.;"
phosphomannomutase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1548_19
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13377..13634)
|
molecular chaperone DnaJ n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA1F2
Molecular chaperone DnaJ {ECO:0000313|EMBL:AJP73879.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_1548_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13634..14428)
|
ATPase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036F7A6C
rbh
ATPase {ECO:0000313|EMBL:AJP73878.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
ATPase MipZ
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1548_21
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14508..15335
|
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomon
pantoate--beta-alanine ligase n=1 Tax=Sphingomonas elodea RepID=UPI0002630B37
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1548_22
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15410..15706
|
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630B38
Uncharacterized protein {ECO:0000313|EMBL:AJP73876.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Sel1 domain-containing protein
|
|
SCNpilot_expt_500_bf_scaffold_1548_23
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15722..16162)
|
Sortase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A356_9GAMM
Sortase {ECO:0000313|EMBL:EAQ99123.1}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
acetyltransferase, N-acetylglutamate synthase
|
|
SCNpilot_expt_500_bf_scaffold_1548_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16159..18699)
|
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
DNA topoisomerase I subunit omega (EC:5.99.1.2)
rbh
DNA topoisomerase I n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F4FFC8
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1548_25
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18830..20362
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAD5_9SPHN
hypothetical protein
rbh
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
|
|
SCNpilot_expt_500_bf_scaffold_1548_26
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20395..21288)
|
putative glutathione S-transferase (EC:2.5.1.18)
glutathione S-transferase n=1 Tax=Sphingomonas elodea RepID=UPI00026306AC
rbh
S-transferase {ECO:0000313|EMBL:AJP73872.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_500_bf_scaffold_1548_27
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21987..23072)
|
DNA processing protein DprA n=1 Tax=Sphingomonas elodea RepID=UPI00026306AF
rbh
DNA processing protein DprA {ECO:0000313|EMBL:AJP73870.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
smf; DNA processing protein; K04096 DNA processing protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1548_28
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23065..23448)
|
ygiH; putative membrane protein YgiH; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15]
glycerol-3-phosphate acyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI00026306B0
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043, ECO:0000313|EMBL:AJP73869.1}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
|
|
SCNpilot_expt_500_bf_scaffold_1548_29
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23761..24558
|
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
glutamate racemase n=1 Tax=Sphingomonas elodea RepID=UPI00026306B1
rbh
|
|
SCNpilot_expt_500_bf_scaffold_1548_30
unknown
|
Not on your lists |
comp(24661..24831)
|
This feature has no annotations |