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SCNpilot_expt_500_bf_scaffold_1151_10

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 5476..6411

Top 3 Functional Annotations

Value Algorithm Source
cation transporter n=1 Tax=Sphingomonas melonis RepID=UPI00037C63D3 similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 314.0
  • Bit_score: 512
  • Evalue 2.40e-142
  • rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EIZ78515.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 315.0
  • Bit_score: 478
  • Evalue 9.10e-132
cation efflux protein similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 323.0
  • Bit_score: 472
  • Evalue 1.10e-130
  • rbh

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Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGGCCACCCTGCCCGAAATCGATGCGTTGGCGCACGACCATGTCTTCCTCGGTGCCGCGCATGACGCGAATGCGCGGCGGACCTTGTGGGTGGTCTGGCTCACTGCGGTGATGATGGTGGGCGAGATCGCTGCGGGCTATTGGACCGGATCGATGGCGCTGCTCGCCGACGGCTTCCACATGGCGACGCATGCCGGCGCCCTGGCCGTTGCCGCTGCGGCCTATGCCTATGCGCGGCGGCATGCGCATAGCGCAGCCTATAGCTTCGGAACGGGCAAGGTGGGCGACCTGGCCGGCTTCGCCTCGGCGATGGTGCTCGGGCTGATCGCGCTGGGGATCGGCGTGGAATCGGTGTTGCGGCTGTTCGAGCCGATCCGGGTGGCGTTCGGCGAAGCGACGATCGTCGCGGTGCTGGGGCTGGCGGTGAACCTTGCCAGCGCGCTGCTGCTCTCGGGCGGGCATCACCACGGCCATGCCCATCGGCATGGCCACGACCATGATCATGGGCACGACCATGACCATCCCCATCGCGGCCACGACAACAATCTGCGCTCGGCCTATATGCACGTCCTCGCCGATGCGCTGACTTCGGTGCTGGCGATCGCAGCGCTGCTGGCCGGGCGCTATCTCGGCTGGGCGTGGATGGATCCGGCGATGGGGATCGTCGGCGCGGTGGTGATCGCGCGCTGGTCGTGGACGCTGATGCGCGACACCGCCGCGGTGCTGCTCGACCGGACCGACGATTCCGTTGCCATGGAAGTGCGCGCGCTGGTCGAGGCCGGGGGCGATGCCCGGATCGTCGACCTGCACGTGTGGCGCGTGGGCCCCGAGGCGTGGGCGGCGATCGTGAGCGTGGTGGGCGTCGATGCGGATGCGATCCGCGCCCGGCTGGCGCCGGTGCACGCGCTGGCGCACCTCACCGTGGAGTGCCGCTGA
PROTEIN sequence
Length: 312
MATLPEIDALAHDHVFLGAAHDANARRTLWVVWLTAVMMVGEIAAGYWTGSMALLADGFHMATHAGALAVAAAAYAYARRHAHSAAYSFGTGKVGDLAGFASAMVLGLIALGIGVESVLRLFEPIRVAFGEATIVAVLGLAVNLASALLLSGGHHHGHAHRHGHDHDHGHDHDHPHRGHDNNLRSAYMHVLADALTSVLAIAALLAGRYLGWAWMDPAMGIVGAVVIARWSWTLMRDTAAVLLDRTDDSVAMEVRALVEAGGDARIVDLHVWRVGPEAWAAIVSVVGVDADAIRARLAPVHALAHLTVECR*