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SCNpilot_expt_500_bf_scaffold_1151_32

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 25199..26629

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003760655 similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 463.0
  • Bit_score: 614
  • Evalue 8.90e-173
TonB-dependent receptor {ECO:0000313|EMBL:AJP74338.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 452.0
  • Bit_score: 612
  • Evalue 6.20e-172
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 468.0
  • Bit_score: 352
  • Evalue 1.50e-94

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1431
GTGGGAATTTCGAGGAAGAATCGTCGCGTCCTGACGCGTGGCATCTCGGCGACGGCGATGGCGGCGGCAACCTTGTTCGCGAGCGGCGCGGTGCTGCTGCCGGGCATGGCTTCGGCGCAGGTGAGCACTGCCAGCGTGCGCGGCCAGGTGATCGGCGCCGACGGCAATGGCGCGGCCGGCGCGCAGGTGGCTGCGCGCAGCACCGCCACCAACCAGATCTGGCGCGCAACCGGCGATGCGAACGGCGGCTATACGCTCACCGGCCTGCGTCCGGGCGAATATGAAGTGACCGCCACGGCGGGCAGCGAGAGCACGACTCAGCGGGTGGTGGTCGCCGTTGGCCAGTCGGCCAGCCTCGATTTGACGATCGGCGGCACGGCGAGCGTGCCCGAGGGCCGGATCGTCGTCACCGGCAGCCGCCTCACCGAGACGCGGACCAGCGAAGTCGCGACCAATGTCAGCGTGACGCAGATCCAGCGCCTGCCGCAGACCGATCGCAACTTCCTGTCCTTTGTCGCGCTCGCGCCGGGCGTGAAGTATAATGATAGCGAGACCAGCAAGGGCTTCACCTCGGGCGCCTCGACCGCCAGCCAGGTCAATGTGTTCATCGACGGCATCAGCCTGAAGAACCAGGTACGCGAGGGCGGCATCGCCGGCCAGCAGAACAGTCGCGGCAATCCGTTCGGCCAGTTGGCCGTGCAGGAGTTCCGCGTCCTCACCCAGAACTACAAGGCCGAATATGAGCAGGCCGGCGCGGCGATCGTCACCGCGGTCACCAAGTCGGGTACCAACGAGTTCCACGGCGAGATCTTCGGCCAGTACACCGACAAGGGGCTGAGCGAGAAGGCGTATCTCGACAAGCGCTACAACCGGCCCGAGCCGGCGTTCGAGCGCAAGCAATATGGCGTGTCGCTCGGCGGCCCGATCATCAAGGACCGGCTGTTCTTCTTCGGTGCCTATGAAGGCAATGACCAGAACCGCGCGTTCAACGTGAAGAGCACCGGCTCGCCGGGGGCGATCCAGCAGTTCGAGCAATATTCGGGCCGCAAGCTGAGCGACTTCGAAGGCGCGTTCGTCAGCCCGTTCCGCGGCGATTTCTACTTCGGCAAGCTGACGCTCACGCCGGACGATCGCCAGACCTTCGACCTGTCGTTCAGCCGCCGCCAGGAAACCGACATCCAGAATTTCGGCGGCATCATCTCCTATGAGAATGCCGAGAACAAGAAGAACAAGATCGATACCTATCTGTTCAAGTGGACCTACAACGAACGCGAGCTACCTGAACTACAACTTCAACCCGACCTCGCTGCACCCCGAGCTGCCGTCCTACGAGTATGCGGGCGTGATCGTGTTCGGCGGCAAGGATTCGACGCGCAACGAGACCCAGCAGAACTACACGCTGCGCGACGACTTCACCTTCACCGGCTTTGA
PROTEIN sequence
Length: 477
VGISRKNRRVLTRGISATAMAAATLFASGAVLLPGMASAQVSTASVRGQVIGADGNGAAGAQVAARSTATNQIWRATGDANGGYTLTGLRPGEYEVTATAGSESTTQRVVVAVGQSASLDLTIGGTASVPEGRIVVTGSRLTETRTSEVATNVSVTQIQRLPQTDRNFLSFVALAPGVKYNDSETSKGFTSGASTASQVNVFIDGISLKNQVREGGIAGQQNSRGNPFGQLAVQEFRVLTQNYKAEYEQAGAAIVTAVTKSGTNEFHGEIFGQYTDKGLSEKAYLDKRYNRPEPAFERKQYGVSLGGPIIKDRLFFFGAYEGNDQNRAFNVKSTGSPGAIQQFEQYSGRKLSDFEGAFVSPFRGDFYFGKLTLTPDDRQTFDLSFSRRQETDIQNFGGIISYENAENKKNKIDTYLFKWTYNERELPELQLQPDLAAPRAAVLRVCGRDRVRRQGFDAQRDPAELHAARRLHLHRL*