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SCNpilot_expt_500_bf_scaffold_2264_28

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 25429..26793

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HF62_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 454.0
  • Bit_score: 628
  • Evalue 7.40e-177
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98039.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 454.0
  • Bit_score: 628
  • Evalue 1.00e-176
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 449.0
  • Bit_score: 460
  • Evalue 4.90e-127

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Taxonomy

Sphingobium baderi → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
ATGCGCATCCTGGCGTTGTCGCTGCTATCTACGCTTTCCTGTGCATCGCCCGTCTTCGCGCAAACTTCCGAGCCGCTGGGGCTGGACTATCGCGCGGCGCAGGACAGGCTGCTCCAGCGCTCCGACGCGATCGAGGCCGCCGCCGCCAATCTGCGCGGCAAGGAAGCGCAGGAAGGCGCGACGCGCACGCTCGGCCGGCCGGACGTGGACGTCGAGGCACAGCTGCTCGAATATCAGAAGACGCTCTATCTGCCGCTCGGATCGCTGGCGCCGGTGGCGGAATTCTTCGGCATCCGCGATCCGCTGAAGTTCCGCCAGGAACGGACGAGCACCCGGCCGATCGTCACCGCCACCCTGCCCTTCTACACCGGCGGCCAGATCTCCGGGACCCGGGCCGGCGCCAGCGCGCAGGTGGCCCAAGCCAAGGCCGATCGCGACATCGCGGTGGACAATGCCCTCGTCCAGCTGGTGCAGGCCTATTACGGGCAGCAGCTCGCCGAGCGGGCGCTGGGCATCCGCCGCGACGTGCTCGACGGGCTCAACCGCCATGTCGCCGACGCGACGAAGCTCGAACAGGCGCGCTTCATCAGCCGCGCGCAGCGCCTGCAGGCGGAAGTGGCGCGCGACGATGCCGCCCGCGAATATGAGAAGGCGATATCGGACCTGGGCACCGCCAATGCCGCGCTCGCCGGCATGCTGCGCGCGCCGGCCGGCGTGCATCCGCTCAGCCCGCTCGGCGTCGATTCGCAGCCGCTGGAGCCGCTCGAGAACTTCAAGGCCGCCGCGCTCTATGCTCATCCCCAGCTGGCCCGGATGCAGGCGCTGGAGGACCAGGCGCGCGCCGGCGTGACGATCCAGCAGTCCAAGCTGCGGCCGACCATCTACGGCTTCGGCCAGTATAATTTCGACAGGCGCGACTCGCTGCTCACCGACCCCGACTGGTCGGTGGGCGTCGGCCTGAAATACAAGCTCATGTCGGGTGCCGGCCGCCGGCAGCAAGTGGATGCCGCGCGCGAGACGGTGGCGCAGGCCGAGGCCGGATTGCGCGAGGCGCGCACCCAGCTCGAAATCGGCGTGACCAAGGCCTGGGGCGAGACGGAGGCGGCGCGCAGGCGCTTCCTGCTGCTGGACAGCGCGCTCGCCTCGGCCACCGAGAATCTGCGGCTGCAGACGCTCTCCTTCCGCGAACAGCAGGTCACGTCGCTCGACGTGATCGACGCACAGCTCGGGCTGGGCCGCGCCCGCGTCCAGCGGGCTCAGGCCGCCAACGACTATGTCCAGGCGCTCGCCCAGCTGCTCAGCCTGAGCGGCCAGATGGCCCGGATGCCCGAGTATCTCGCCCGGGCCGACAAGGTGATCCCATGA
PROTEIN sequence
Length: 455
MRILALSLLSTLSCASPVFAQTSEPLGLDYRAAQDRLLQRSDAIEAAAANLRGKEAQEGATRTLGRPDVDVEAQLLEYQKTLYLPLGSLAPVAEFFGIRDPLKFRQERTSTRPIVTATLPFYTGGQISGTRAGASAQVAQAKADRDIAVDNALVQLVQAYYGQQLAERALGIRRDVLDGLNRHVADATKLEQARFISRAQRLQAEVARDDAAREYEKAISDLGTANAALAGMLRAPAGVHPLSPLGVDSQPLEPLENFKAAALYAHPQLARMQALEDQARAGVTIQQSKLRPTIYGFGQYNFDRRDSLLTDPDWSVGVGLKYKLMSGAGRRQQVDAARETVAQAEAGLREARTQLEIGVTKAWGETEAARRRFLLLDSALASATENLRLQTLSFREQQVTSLDVIDAQLGLGRARVQRAQAANDYVQALAQLLSLSGQMARMPEYLARADKVIP*