name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_2264_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..686
|
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W5R8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AJP73223.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_2 |
Not on your lists |
comp(756..2534)
|
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W507_9ZZZZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:AGU10017.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_3 |
Not on your lists |
comp(2544..4094)
|
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W5J7_9ZZZZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:AGU10018.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_4
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4094..5578)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002EE446D
rbh
Putative membrane protein {ECO:0000313|EMBL:EZP51743.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5854..7074)
|
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
argininosuccinate synthase n=1 Tax=Sphingomonas elodea RepID=UPI0002630743
rbh
|
|
SCNpilot_expt_500_bf_scaffold_2264_6 |
Not on your lists |
7189..7608
|
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W7B6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGU10025.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7596..8858)
|
Mycolic acid cyclopropane synthetase n=1 Tax=uncultured organism RepID=T1W5S7_9ZZZZ
rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AJP73227.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
cyclopropane-fatty-acyl-phospholipid synthase
rbh
|
|
SCNpilot_expt_500_bf_scaffold_2264_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8948..9685)
|
Oxidoreductase molybdopterin binding domain n=1 Tax=uncultured organism RepID=T1W514_9ZZZZ
rbh
Molybdopterin-binding protein {ECO:0000313|EMBL:AJP73228.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative oxidoreductase; K07147
rbh
|
|
SCNpilot_expt_500_bf_scaffold_2264_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9682..10371)
|
Prokaryotic cytochrome b561 n=1 Tax=uncultured organism RepID=T1W5K3_9ZZZZ
rbh
HupC {ECO:0000313|EMBL:AJP74611.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative cytochrome B561
|
|
SCNpilot_expt_500_bf_scaffold_2264_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10389..10604)
|
Sulfite exporter TauE/SafE n=1 Tax=uncultured organism RepID=T1W7C7_9ZZZZ
Membrane protein {ECO:0000313|EMBL:AJP73230.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative transmembrane protein; K07090
|
|
SCNpilot_expt_500_bf_scaffold_2264_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10604..11107)
|
Sulfite exporter TauE/SafE n=1 Tax=uncultured organism RepID=T1W7C7_9ZZZZ
Membrane protein {ECO:0000313|EMBL:AJP73230.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein; K07090
|
|
SCNpilot_expt_500_bf_scaffold_2264_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11104..12381)
|
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1
50S rRNA methyltransferase n=1 Tax=Sphingomonas elodea RepID=UPI00026308E2
radical SAM protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_13 |
Not on your lists |
comp(12398..13333)
|
NADH(P)-binding n=1 Tax=uncultured organism RepID=T1W512_9ZZZZ
rbh
NADH(P)-binding {ECO:0000313|EMBL:AGU10022.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13427..14305
|
LysR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC977
rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AJP74612.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_500_bf_scaffold_2264_15
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14410..14811
|
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K2X8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB30919.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14973..15431)
|
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDCA2
Uncharacterized protein {ECO:0000313|EMBL:AJP73234.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_17
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15428..16075)
|
phosphoglycerate/bisphosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
phosphoglycerate mutase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031D1B4B
rbh
Phosphoglycerate mutase {ECO:0000313|EMBL:AJP73235.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_expt_500_bf_scaffold_2264_18 |
Not on your lists |
16385..16993
|
Outer membrane protein beta-barrel domain n=1 Tax=uncultured organism RepID=T1W5U3_9ZZZZ
Outer membrane protein beta-barrel domain {ECO:0000313|EMBL:AGU10046.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
putative outer membrane protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_19 |
Not on your lists |
17113..18243
|
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
rbh
DNA polymerase III beta subunit, central domain n=1 Tax=uncultured organism RepID=T1W6B5_9ZZZZ
rbh
DNA polymerase III beta subunit, central domain {ECO:0000313|EMBL:AGU10044.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
|
|
SCNpilot_expt_500_bf_scaffold_2264_20
unknown
|
Not on your lists |
comp(18416..19054)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_2264_21
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19047..19265)
|
DNA-binding protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B6AB4D
Cro/CI family transcriptional regulator; K07729 putative transcriptional regulator
Transcriptional regulator,Cro/CI family {ECO:0000313|EMBL:ACG79342.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
|
|
SCNpilot_expt_500_bf_scaffold_2264_22
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19422..20186
|
coenzyme q (ubiquinone) biosynthesis protein coq4 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D3BAB1
rbh
Ubiquinone biosynthesis protein {ECO:0000313|EMBL:AJP73238.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_23
unknown
|
Not on your lists |
comp(20202..20951)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_2264_24
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21025..22089
|
DNA repair protein RecF n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002EBE24A
rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
recF; recombination protein F
rbh
|
|
SCNpilot_expt_500_bf_scaffold_2264_25
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22151..22672
|
TonB-like protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z3Z9_9SPHN
TonB-like protein {ECO:0000313|EMBL:EGD60677.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
TonB-like protein; K03832 periplasmic protein TonB
|
|
SCNpilot_expt_500_bf_scaffold_2264_26
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22612..23214)
|
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WH30_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAQ28787.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. NAP1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_27 |
Not on your lists |
23342..25204
|
DNA gyrase B n=1 Tax=uncultured organism RepID=T1W522_9ZZZZ
DNA gyrase B {ECO:0000313|EMBL:AGU10037.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
|
|
SCNpilot_expt_500_bf_scaffold_2264_28
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25429..26793
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HF62_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98039.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
outer membrane efflux protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_29
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26790..27812
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G2Z1_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98040.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
secretion protein HlyD family protein; K01993 HlyD family secretion protein
|
|
SCNpilot_expt_500_bf_scaffold_2264_30
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27818..28984
|
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GBL1_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQA98041.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
rbh
|