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SCNpilot_expt_500_bf_scaffold_1705_23

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(25403..26401)

Top 3 Functional Annotations

Value Algorithm Source
Mandelate racemase {ECO:0000313|EMBL:AJP71201.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 327.0
  • Bit_score: 421
  • Evalue 8.20e-115
Mandelate racemase/muconate lactonizing enzyme id=2430538 bin=GWF1_Xanthomonadales_69_6 species=Phenylobacterium zucineum genus=Phenylobacterium taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 327.0
  • Bit_score: 341
  • Evalue 1.30e-90
mandelate racemase/muconate lactonizing enzyme similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 328.0
  • Bit_score: 337
  • Evalue 4.60e-90

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGAAAGTGGATGCACGAGCCGAACAATGGGAGATGGCGGAGCCGTTCCGCATCTCCGGCGAGACGTTCACCCATGCCGAGATCGCCGTGGTCACGATCGAGGATCGCGGCATCATCGGCCGCGGCGAGGCATGCGGCGTCTATTATCGGGGCGACACCTCGGCGCGGATCGTCGAGCAGGTGACGCGGCTCGCGCCGATACTCGCGGAAGGCATCGATCGCGCCGCGCTTCAGCGCCTGCTGCCGGCCGGGGGCGCACGAAACGCGCTCGACGCCGCGCTCTGGGAAATCGAGGCGGGCCATGCCGGAAAGCCGGTATGGCAGCTTGCCGGCCTGTCCGGGACACGGTCGCTCCCCACCGTCTTCACGATCGGCATCGCTTCGCCGGGGGAAATGGCGCGGAAGGCGGCGGGCATGGCGCACGCGCGCCAGATCAAGCTGAAGCTGGAAGGCAATGGCGAGGACGGGGAACGGGTCAGGGCGGTGCGCGCGGCTCGCCCCGATGCCGCGATCGCCGTCGATGGAAACCGCGGCTTCGATCCGGATGGGCTCGATGCGATCATGCCGATATTGCGCGCGGCCGGCGTGACGCTGATCGAACAGCCCTTCGCGATCGGGCGAGATGCGGACCTGCGCCATGTCGACCGCGCCATCCCGATCGCGGCGGACGAGAGCGTCCAGGACAGCGACGATCTCGAGGGGCTGGTCGGCCTGGTCGACCTCGTCAACATCAAGCTCGACAAGTGCGGCGGCCTTACGCACGCGCTCGAAATGGAACGCAATGCGCGCCGCATGGGCTTCCGCGTCATGGTCGGGAACATGACCGGCACGAGCTGGTCGCAAGCCCCCGCCTTCATCCTCGGCCAGCGATGCGACCTTTGCGACCTGGACGGGCCCACGTTCCTCGCCCGGGATCGCACGCCGGGCGTCCGCTATGCCGACGGCCTGATTCATTGCCCGGATGCGATTTGGGGCGGCGGGCGCCGACGCGAACCGTAG
PROTEIN sequence
Length: 333
MKVDARAEQWEMAEPFRISGETFTHAEIAVVTIEDRGIIGRGEACGVYYRGDTSARIVEQVTRLAPILAEGIDRAALQRLLPAGGARNALDAALWEIEAGHAGKPVWQLAGLSGTRSLPTVFTIGIASPGEMARKAAGMAHARQIKLKLEGNGEDGERVRAVRAARPDAAIAVDGNRGFDPDGLDAIMPILRAAGVTLIEQPFAIGRDADLRHVDRAIPIAADESVQDSDDLEGLVGLVDLVNIKLDKCGGLTHALEMERNARRMGFRVMVGNMTGTSWSQAPAFILGQRCDLCDLDGPTFLARDRTPGVRYADGLIHCPDAIWGGGRRREP*