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SCNpilot_expt_500_bf_scaffold_2502_7

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 8474..9724

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B40C3D similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 414.0
  • Bit_score: 383
  • Evalue 3.80e-103
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EZP49022.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 423.0
  • Bit_score: 382
  • Evalue 9.10e-103
hypothetical protein; K15727 cobalt-zinc-cadmium resistance protein CzcB similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 359.0
  • Bit_score: 247
  • Evalue 7.80e-63

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
TTGACCGAAACCGTCCCGCCCGCGCCATCGCCGGAAGCGCTGCCCCGCAGGCGGCAGATCGCCTATGTGCTGGCCGGCGCGGCGATCCTGCTGGCCGCGATCGTGCTGGCGTCGCTGCTGCACCGGCAGGATCCCGATCCGGCGGAGACACCGGGCGAACCGGGGATATTCCAGGCGACCCCGGATCAATATGCCGCCATGGAGATCCGCGCGGTGGGAACGGCGGCGGATGGCGCGACTGTGCGCGCGACCGGCACCATCTCGGTCGATGAAGACCGTTCCACGCCGGTGCTGCCGCCGCTGACCGGCCAGGTGACTCGCGTGTTCGTCGAAGCCGGGCAACGCGTCGCCCATGGCCAGCCGCTGTTCGAAATCCGATCGACCGAGCGGGCGCAGGGCGCCAACAGCCTGGTCGCGGCCGCTGCCCAGCGCGACACCGCGCGCGCCCAGCTCGGCATCGCCCAGGGCAATGCCCAGCGCGAGGAACTGATCTACCGGAATGGCGGCGGCGCGCTGCGCGACTATCAGCAGGCGAAGAGCGAGCTGGTCGCCGCGCAGGCGGCGATGCGCACCGCCGATGCCGCCTATGTCGTGGCGCGCAACCAGATCGCGATCCAGGGCGGCACGGCGGGGGACATCGCGCGTATCGCCCGGGGCGGGCTGGCCGGAAATGCGATCGTGCGCGCGCCGATCGGCGGGATCGTCGCCAATCGCGCGATCAGCGCCGGCCAGTATCTCGGCGCGGCTTCGGAGGGGCCGGCGCTGGTGATCACCGATCCCGCCTCCGTATGGCTGGTGGCGCAAGTTGCCGAGAGCGATGCGAGCCGGGTCCGCGTCGGCGATCAGGTGACGGTGACGACCCCGGCCGCTCCGGGCCGGCACTTCACCGCGCAGGTGCGGATGGTCGGGTCCGCGCTCGATCCGAATACCCATCGCCTGCCGGTCCGCGCCGTCATCGCCAATCCCGACGGCGTGCTCAAGCCCCAGATGTTCGCAAGCTTCGCCATCGCCGCACCGGCAAGGGCCGCGCCCGGGACCGCGCTCGTCGTCCCCGCGGAAGCCGTCATCCGCGAAGGCGACAATGCCCGCGTCTGGGTCGCCCAGCCCGGCCGACGCCTCGTCGCCCGCAACGTGGCCGTGGCGGAGGGCCCGGGCGACGGCACGATCCGGATCACCGTGGGGCTCCGCCCCGGCGAGCGGATCGTCACCAAGGGCGCCATCTTCGTCAACGAAGCCGGCATTCCGGGCTGA
PROTEIN sequence
Length: 417
LTETVPPAPSPEALPRRRQIAYVLAGAAILLAAIVLASLLHRQDPDPAETPGEPGIFQATPDQYAAMEIRAVGTAADGATVRATGTISVDEDRSTPVLPPLTGQVTRVFVEAGQRVAHGQPLFEIRSTERAQGANSLVAAAAQRDTARAQLGIAQGNAQREELIYRNGGGALRDYQQAKSELVAAQAAMRTADAAYVVARNQIAIQGGTAGDIARIARGGLAGNAIVRAPIGGIVANRAISAGQYLGAASEGPALVITDPASVWLVAQVAESDASRVRVGDQVTVTTPAAPGRHFTAQVRMVGSALDPNTHRLPVRAVIANPDGVLKPQMFASFAIAAPARAAPGTALVVPAEAVIREGDNARVWVAQPGRRLVARNVAVAEGPGDGTIRITVGLRPGERIVTKGAIFVNEAGIPG*