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SCNpilot_expt_500_bf_scaffold_2502_23

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(27892..29175)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator (EC:2.6.1.39) similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 426.0
  • Bit_score: 640
  • Evalue 3.30e-181
  • rbh
GntR family transcriptional regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B6C0D9 similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 426.0
  • Bit_score: 660
  • Evalue 1.30e-186
  • rbh
Transcriptional regulator with HTH domain and aminotransferase domain-containing protein {ECO:0000313|EMBL:EJL57853.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 426.0
  • Bit_score: 648
  • Evalue 7.00e-183

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
GTGCTCAAGCCGGGCGATCGCCTGCCGCCGCAGCGCGCTTTCGCCTATCAGCACGATATTGCCGTTTCGACCGCGAGCCGCGTCTATGCCGAATTGCTCCGTCGGCGCCTCGTGGTCGGCGAAGTGGGGCGCGGCACCTTTGTCTCGGGGCAATCCGGGCGTGGCGTCGAAGCACCGGGTGAGCCGCGCGGCATCCGGATCGATCTCGAATTCAACTATCCGATCCTGCCCGGTCAGACCGCACTGATCGCGAAGAGCCTGAAGGGTCTCGACGCACCCGCGCCGCTAGAGGCCGCGTTGCGACAGGCGACCAGTGTCGGGACGGAGGCGGCTCGAAATATCGGCGCTGCGTTTCTGGCGCAGGGAAGCTGGTCGCCCGACGCCGATCAACTCGTCTTTGCGGGCAATGGGAGACAGGCCATCGCCGCCGCGCTTGCCGCCCTGGTTCCGACCGGCGGGCGCTGCGGGGGCGAAACCCTGACCTATCCCTTCATCAAGGGAATCGCCTCCCGGCTGGGCATCACCCTGGTTCCGCTGACGATGGACGAAGATGGCGTGCGGCCGGATTCGGTGGAGAAGGCCCACCGCGAAGCGCGGCTCTCGGCCCTCTATGTTCAGCCGGCGGTTCAGAATCCGCTCGGCATCACGATGCCGCTTTCGCGTCGGACCGATCTCTTGCGGGTGGCCGAAGCGCTTGGGATCATGATCATCGAAGACCGGGTATATGGCTTTCTCGATGACGCGCCGCCTCTCGCCGCGCTTGCCCCGAATGCATGCGTTGTCGTCGACAGCCTGTCCAAGAGGGTGGCGCCCGGCCTTTCGCTCGGCTTCATCATCCCGCCGCCGCATCTGCGCGAGGACATGAAGGCGCTGGTCCGCTCGGGCGGCTGGACCGCCTCGGGATTTGCGTTCGCCGCAGCCCAGCGCATGATGGGGGACGGCACGGTTGCCGAGCTGGTCAGGCTGAAACGGCTCGACGCCCGTGCGCGCCAGAAGCGTGCGGCCGAGCATCTCTCCGGGTTCGAGATTCGGGCGAACGAGAATTGCTATCACCTCTGGCTGACGCTCCCGCAGCATTGGCGCTCGCAGAACTTCGTCGTCGCGGCGGCCAGGCGGGACGTTGCGCTAACCCCTTCGACGACCTTTGCGGTCACTCCGGGCCATGCGCCCAATGCCGTCAGGCTCGCATTGGCGACCCCGGCGATGGACCAGCTCGATACGGGGCTGCGCACCCTGGCTGCGATACTGCGCGCGCGTGAAGAGGATATGGAGTCGACCGAATGA
PROTEIN sequence
Length: 428
VLKPGDRLPPQRAFAYQHDIAVSTASRVYAELLRRRLVVGEVGRGTFVSGQSGRGVEAPGEPRGIRIDLEFNYPILPGQTALIAKSLKGLDAPAPLEAALRQATSVGTEAARNIGAAFLAQGSWSPDADQLVFAGNGRQAIAAALAALVPTGGRCGGETLTYPFIKGIASRLGITLVPLTMDEDGVRPDSVEKAHREARLSALYVQPAVQNPLGITMPLSRRTDLLRVAEALGIMIIEDRVYGFLDDAPPLAALAPNACVVVDSLSKRVAPGLSLGFIIPPPHLREDMKALVRSGGWTASGFAFAAAQRMMGDGTVAELVRLKRLDARARQKRAAEHLSGFEIRANENCYHLWLTLPQHWRSQNFVVAAARRDVALTPSTTFAVTPGHAPNAVRLALATPAMDQLDTGLRTLAAILRAREEDMESTE*