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SCNpilot_expt_500_bf_scaffold_2678_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 2..538

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031DF3CD similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 175.0
  • Bit_score: 272
  • Evalue 3.10e-70
C4-dicarboxylate transporter {ECO:0000313|EMBL:AJP71469.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 176.0
  • Bit_score: 282
  • Evalue 3.20e-73
sodium:dicarboxylate symporter; K11103 aerobic C4-dicarboxylate transport protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 177.0
  • Bit_score: 269
  • Evalue 6.30e-70

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
TACATAAAGGCCGAGCTGCTGCTCGTCCTTGGCGCCTCCTCCTCCGAAGCCGCCCTCCCCGCGCTGATCGACAAGCTGGAACGCGCCGGTTGCGACAAGGAAGTGGTCGGCGTGGTGGTGCCGGCCGGCTATTCGTTCAACCTCGACGGCACCAACATCTACATGACGCTCGCTGCGCTGTTCATCGCCCAGGCAACCGGCGTGCACCTCTCGCTCGGCGAGCAACTCATCCTGCTCGGCACCGCCATGCTCACGTCCAAGGGCGCGGCGGGCGTCACCGGCGCGGGCTTCGCGACACTGGCCGCGACCCTGATGGTGGTTCCCTCGATCCCCGTGGCGGGCATGGCACTGATCCTCGGCGTCGACCGCTTCATGAGCGAGTGCCGCAGCCTCACCAATTTCATCGGCAACGCCGTGGCGACGATCGTGGTGGCGCGCTGGGAAGGCCGGCTCGACCGCGAAGCCTTGCGACGCGCGCTCGACGGCACGGCCGACGCGGCGCCCGCACGCGCCGCCATCGAAGTCGATATGGGGTGA
PROTEIN sequence
Length: 179
YIKAELLLVLGASSSEAALPALIDKLERAGCDKEVVGVVVPAGYSFNLDGTNIYMTLAALFIAQATGVHLSLGEQLILLGTAMLTSKGAAGVTGAGFATLAATLMVVPSIPVAGMALILGVDRFMSECRSLTNFIGNAVATIVVARWEGRLDREALRRALDGTADAAPARAAIEVDMG*