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SCNpilot_expt_500_bf_scaffold_2678_21

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(20306..20869)

Top 3 Functional Annotations

Value Algorithm Source
methyl-accepting chemotaxis protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6E111 similarity UNIREF
DB: UNIREF100
  • Identity: 32.4
  • Coverage: 176.0
  • Bit_score: 99
  • Evalue 2.90e-18
Chemotaxis protein {ECO:0000313|EMBL:AJP71063.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 170.0
  • Bit_score: 104
  • Evalue 1.30e-19
methyl-accepting chemotaxis sensory transducer similarity KEGG
DB: KEGG
  • Identity: 26.7
  • Coverage: 176.0
  • Bit_score: 71
  • Evalue 3.50e-10

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGAATATTCAGGATATGCCGATACCGCGTAAGCTCGCGGCGGCCTTCGTCGCGCTCGTCTGCATCTTCGCCGGTATCGGCTGGTTGCTCTTCTCGAGCCTGCAGACGGTCGGAACCGCCTCCGAAGACAAGGAGCGCGCATTCGACGTCACGGCCAGCTCCGACCAGATCATGATGCAGATCCTCGAGGGGCAGAGTGCGGTGCGTGCCTATGTCATTCTTCGGAATCCGGATTTCCTGGCCACCTATCAGGATTCCCGCAAGAAGATCGGCGCGGCTGCCGAGGCCTTCCGGAGCCAGACCAAGGTGCCCGAGCAGCGGGCGCGGCTCGACAAGCTGGTGAACGCCGTCCAGGAGCTCGACGGCAAGCTCGATCACATGATCACGCTTGCCCGGAACCCCGCGACCCAGGCGGAGGCGCAGCAGCTGGCCGGCGTCAAGCAACTCGGCGCGATCCGCGAGATCATGGGTGAGATCGACCGGGGTCAGCACGAACGCGTGGCCTCGACCAAGAAGGTGGAATCGCCATTGCGGTGCTGCTCGGCTGGCTGCTCACCACGATGA
PROTEIN sequence
Length: 188
MNIQDMPIPRKLAAAFVALVCIFAGIGWLLFSSLQTVGTASEDKERAFDVTASSDQIMMQILEGQSAVRAYVILRNPDFLATYQDSRKKIGAAAEAFRSQTKVPEQRARLDKLVNAVQELDGKLDHMITLARNPATQAEAQQLAGVKQLGAIREIMGEIDRGQHERVASTKKVESPLRCCSAGCSPR*