ggKbase home page

SCNpilot_expt_500_bf_scaffold_2415_11

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 7536..9335

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631DD9 similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 599.0
  • Bit_score: 943
  • Evalue 8.00e-272
  • rbh
ABC transporter {ECO:0000313|EMBL:AJP70953.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 599.0
  • Bit_score: 965
  • Evalue 2.80e-278
lipid ABC transporter ATPase/inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 586.0
  • Bit_score: 774
  • Evalue 2.60e-221

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1800
ATGGCCGAACCCGTCCCGCCTGCGCCCGCGCTCCCCCCGTCCGATGGGCCGCAGCGGCGCAAGATCTCCAATCTCCTGGTCGTTTGGGGCTTCACGCGGCGCTATCCGCTTCAGCTGCTGATCGCGATCGTCGCGCTGATCGGCTCGTCGCTGACGACGCTGCTGATCCCCCGCACCTTCCAGAAGATCGTCGACCATGGCTTCGCCGCCGGAGCGGACACCAGCCGGATCGGCATCTATTTCCAGGGGCTGCTGCTCGTCGTCGTGGCGCTCGCGGCCTTCACCGCGGTCCGCTTCTATTTCGTTTCCTGGCTGGCCGAGCGCACCGTCGCGGACCTGCGCATGGCGGTGCACCGCAACCTGCTCCGCCTCCCGCCCAAATGGTTCGAGGAGAACCGCCCGTCCGAGATCGCCTCGCGCCTCACCGCGGACACCGCGGTGGTCGAGCAGGTGGTCGGCTCCACCGTCTCGATCGCGCTCAGGAACCTGCTCACCGGCGCGGGCGGCGTCATCTATCTCTTCGCGCTCGCGCCCAAGAGCGCCGCCTATCTGGTCGTCGGCATCCCGGTCACCATCCTGCCGATCGTCTGGCTGGGCAGCCGGGTGCGGCAATTCTCGCGCACCAGCCAGGACCGGGTGGCCGATGTGGGCGCGATCGCCTCGGAGACGCTGGGCGCGATGCGCATCGTCCAGGCCTTCGGGCAGGAGCAGCGCGAGGCCGAGCGCTTCCAGGGCGCCGTCACCCGCACCTTCGAAGCCGGCAAGCGCCGCTTCGGCCTGCGCGCGATCATGACGGCGCTGGTGATCGGCTCGCTGTTCACGGCGATCACGCTGATCGTATGGGCCGCGGTGGCCGATGTCGCCGCCGGCCGGCTATCGGGCGGCTCGATCATGGCGTTCGTCCTCACCGCCGGCCTCGTCACCGGCTCGTTCGGCGCGCTTACCGAAGTCTATGGCGACCTGCTGCGCGCCTCGGGCGCGGCCAGCCGCCTCGCCGAACTGCTCCATCAGCAGCCCGACATCGCGGCCCCCGCCAGTCCCGTGCCACTTCCCCAGCCGCCCCAGGGCGCGCTCGCCTTCGACCGGGTCACCTTCCGCTATCCCACCCGCCCGGACAGCGCCGCGCTCACCGACTTCTCGCTCGAGGTCCGCCCCGGCGAGACGGTGGCGGTGGTCGGCCCCTCGGGCGCCGGCAAGTCGACGCTCTTCCAGCTGCTCCAGCGCTTCTACGATCCCGATGGCGGCGAAGTCCGTGTCGACGGTGTACCGGTCCCTGCGGCCGATCCGGCCGATATCCGCGCGCGCATGGCGATGGTGCCGCAGGAGACGGTGATCTTCGGCGCCTCGGCGCGCGACAATCTGCGCTATGGCGCCTGGGGCGCGACCGACGACCAGATCTGGGCCGCCGCCGAAGCCGCCAACGCCGCCGATTTCCTGCGCGACCTGCCCCAGGGCCTCGACACCTTCCTCGGCGAAGGCGGTGCGCGGCTTTCGGGCGGACAGCGCCAGCGCGTCGCCATCGCCCGCGCGCTGCTCCGCGACGCTCCCATATTGCTGCTCGACGAAGCCACCTCCGCGCTCGACGCCGAGAGCGAACGCCTTGTCCAGGACGCGCTCGAGCGGCTGATGGAGCACCGCACCACGCTCGTCATCGCCCATCGCCTCGCCACGGTGCGCGCCGCCGGCCGGATCATCGTCATGGAGGAAGGCCGCATCGTCGAGACCGGCACCCATGCCGAGCTGGTCGCGCGGGGCGGCCTCTACGCCCGGCTGGCCGCGTTGCAGTTCCACGAAGCCTGA
PROTEIN sequence
Length: 600
MAEPVPPAPALPPSDGPQRRKISNLLVVWGFTRRYPLQLLIAIVALIGSSLTTLLIPRTFQKIVDHGFAAGADTSRIGIYFQGLLLVVVALAAFTAVRFYFVSWLAERTVADLRMAVHRNLLRLPPKWFEENRPSEIASRLTADTAVVEQVVGSTVSIALRNLLTGAGGVIYLFALAPKSAAYLVVGIPVTILPIVWLGSRVRQFSRTSQDRVADVGAIASETLGAMRIVQAFGQEQREAERFQGAVTRTFEAGKRRFGLRAIMTALVIGSLFTAITLIVWAAVADVAAGRLSGGSIMAFVLTAGLVTGSFGALTEVYGDLLRASGAASRLAELLHQQPDIAAPASPVPLPQPPQGALAFDRVTFRYPTRPDSAALTDFSLEVRPGETVAVVGPSGAGKSTLFQLLQRFYDPDGGEVRVDGVPVPAADPADIRARMAMVPQETVIFGASARDNLRYGAWGATDDQIWAAAEAANAADFLRDLPQGLDTFLGEGGARLSGGQRQRVAIARALLRDAPILLLDEATSALDAESERLVQDALERLMEHRTTLVIAHRLATVRAAGRIIVMEEGRIVETGTHAELVARGGLYARLAALQFHEA*