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SCNpilot_expt_500_bf_scaffold_2415_16

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(12245..14476)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 741.0
  • Bit_score: 1123
  • Evalue 0.0
ribonuclease R n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036019FE similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 745.0
  • Bit_score: 1251
  • Evalue 0.0
  • rbh
ribonuclease R similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 746.0
  • Bit_score: 1078
  • Evalue 0.0
  • rbh

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Taxonomy

Sphingomonas sp. Ant20 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2232
ATGGCAAAAACCAAAATCAAAGCAGGGCTGCCCACGCGGCAGCAGATTCTCGATTTCATCACCAATTCCGATACGCCGGCCGGCAAGCGCGAGATCGCCAAGGCCTTCGGGTTGCATGGGCAGGACAAGATCCTGCTCAAGGCCTTGCTCAAGGACATGAGCGACGAGGGGCTGATCGACGTCGCCCCGGGCCGCGCCTTCCACAGGATGGGCGGCGTGCCCAAGGTCACCGTGCTGCGCGTCACCGATGCGGACGGCGACACCACCTGGGCGGTGCCCGAGCGCTGGGAGGCCGAAGGCGTGCCCGTGCCGCGGCTCCGCGTCCGCGAAGCGCGCGGCAAGCGTTCCGCGCTCGCCATCGGCGACCGCATCCTCGCTCGCACCGAAGAGGCCGGCAACGGCTGGATCGCGCATCCGATGAAGAAGCTCGCCCGCGGCGAGGAGCTGATGCTCGGCGTGCTCAAGGAAGAGGCCGGGCGGCTCTGGCTGCAGGGCGTGGAGAAGAAGGAGCGGCGCAACTGGCCGGTCTCCGATGCCGGCGGCGCCCAATCGGGCGACCTCGTCCTCGCCGAGAAGGCCGGCCGGCCGCCGCGAATCACCGCCAAGGTGGTCGAAGTGCTGGGCGATCCCTTCGCGCCGCGCAGCTTCTCGCTGATCGCGATCCACCGGCACTCGATCCCCAATATCTTCTCGCAGGAGCTGCTCGACGAGGCCGAGCGGGTGTCCCGCCTCGATCTGGGCAAGCGGGAGGATCTTCGCCACCTGCCGATCGTCGCGATCGACCCGGCCGATGCGCGCGACCATGACGACGCGGTCTGGGCGGCGCCCGACGAGGATCCGAAGAACGACGGCGGCTGGAAGGCCGTCGTCGCGATCGCCGACGTGTCCTTCTATGTCCGCCCCGGCTCGGAGCTGGACCGCGAGGCGCGCAAGCGCGGCAACTCGGTCTATTTCCCCGATCGCGTCGTGCCGATGCTGCCCGAGATCCTCTCGGCGGAAGTCTGCTCGCTCAAGCAGGGCGAGGACCGGGCTGCGCTCGCCTGCCACCTCCAGATCGGCAGGCATGGCGAGCTGAAGAGCTGGCGCTTCACCCGCGCCGTGGTCAGCATCGCGGCCAACATCGCCTATGAGGACGCCCAGGCGGCGATCGACGGCACGCTCGATCACCCGCTGACCGAGACGGCGCTCAGGCCGCTCTGGGACTGCTGGCACGCCCTCAATAAGGCGCGCGACAAGCGCGAGCCGCTCGACCTCGATCTGCCCGAGCGCCGGATCGTGCTCGACGAGATGGGCCGCATCCTATCCGTGGCGCCGCGCGAGCGGCTCGACGCGCACAAGCTGATCGAGGACTATATGATCGCGGCGAACGTCGCCGCGGCCAAGGCGCTGGAGGCGAAGAAGGCGCCGGTGATGTACCGCATCCACGAGCCGCCGGCCCGGGAGAAGCTGGTCGCGCTGCGGGAGTATCTGAAGACCTTCGGGGTGGAGTTCGCGCTGGGCCAGGTCATCAAGCCGGCTACCTTCAACCGCATCCTCGAACGGGTGGGGGAGAGCGACTTCCGCGAGCAGGTGATGCAGCAGGTGCTGCGCACCCAGACCCAGGCCTATTATGGCCCTGCCAATCACGGCCATTTCGGCCTGTCGCTGGGCAGCTATGCGCACTTCACGTCGCCGATCCGCCGCTATGCCGATCTGATCGTCCACCGTGCGCTGGTCGAGGCCTATGCCCTGGGCCCCGGCGGGCTGACGGCCGAGGAAGCCGCGGGAATGGAGCGGATCGGCGAGAGCATCTCCAGCCTGGAGCGCCGGGCGATGGAGGCCGAGCGGGAGACCATCGACCGCTATGTCGCTGCCTATCTCGCCAACCATGTCGGCGAAATATTGGAGGCGCGGATCACCGGGGTGCAGAGCTTCGGTTTCTTCGCCACGGTGGACGGCGTCGGCGGCGACGGGCTGGTCGCGGCGCGGGACCTGGGCACCGAATATTTCCGCTATGACGAGGCCGGGCAACGGCTGGTGGGCGACGAGAGCGGCGAGGAATTCACCCTGGGCCAGCGCCTCCGGCTCCGGCTGGTGGAGGCCAATCCGGTTTCCGGCGCGCTCCGCTTCGAACTGCCCGACGGCAAGGGCTCGGCGGGCCCGTCCGCCTTTGCCAGGGATCGCGGCAAGGGGCGCCCCCGCCCCATCAAGCGCCGCGGCCGGCCGCCCAATATCCGGCACAAGAGCCGTTGA
PROTEIN sequence
Length: 744
MAKTKIKAGLPTRQQILDFITNSDTPAGKREIAKAFGLHGQDKILLKALLKDMSDEGLIDVAPGRAFHRMGGVPKVTVLRVTDADGDTTWAVPERWEAEGVPVPRLRVREARGKRSALAIGDRILARTEEAGNGWIAHPMKKLARGEELMLGVLKEEAGRLWLQGVEKKERRNWPVSDAGGAQSGDLVLAEKAGRPPRITAKVVEVLGDPFAPRSFSLIAIHRHSIPNIFSQELLDEAERVSRLDLGKREDLRHLPIVAIDPADARDHDDAVWAAPDEDPKNDGGWKAVVAIADVSFYVRPGSELDREARKRGNSVYFPDRVVPMLPEILSAEVCSLKQGEDRAALACHLQIGRHGELKSWRFTRAVVSIAANIAYEDAQAAIDGTLDHPLTETALRPLWDCWHALNKARDKREPLDLDLPERRIVLDEMGRILSVAPRERLDAHKLIEDYMIAANVAAAKALEAKKAPVMYRIHEPPAREKLVALREYLKTFGVEFALGQVIKPATFNRILERVGESDFREQVMQQVLRTQTQAYYGPANHGHFGLSLGSYAHFTSPIRRYADLIVHRALVEAYALGPGGLTAEEAAGMERIGESISSLERRAMEAERETIDRYVAAYLANHVGEILEARITGVQSFGFFATVDGVGGDGLVAARDLGTEYFRYDEAGQRLVGDESGEEFTLGQRLRLRLVEANPVSGALRFELPDGKGSAGPSAFARDRGKGRPRPIKRRGRPPNIRHKSR*