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SCNpilot_expt_500_bf_scaffold_2415_23

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(19111..20589)

Top 3 Functional Annotations

Value Algorithm Source
Proline--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000255|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01571}; Short=ProRS {ECO:0000255|HAMAP-Rule:MF_01571};; TaxID=179878 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas elodea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 510.0
  • Bit_score: 834
  • Evalue 1.00e-238
proS; prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 509.0
  • Bit_score: 804
  • Evalue 2.60e-230
  • rbh
Proline--tRNA ligase n=1 Tax=Sphingomonas elodea RepID=SYP_SPHEL similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 510.0
  • Bit_score: 834
  • Evalue 7.30e-239
  • rbh

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Taxonomy

Sphingomonas elodea → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1479
ATGATCAAGCATGCGCTCAACGTCACCCGCGAAGCCAATTTCGCCGAATGGTACCAGACCGTCATCACCGAGGCCGACATGGCCGAGGAAAGCGGCGTGCGCGGCTGCATGGTCATCCGGCCGTGGGGCTATGGCATCTGGGAGCGGATCCAGCGCCTGCTCGACGATCGCATCAAGGCGACCGGCCACGAGAATTGCTATTTCCCGCTGTTCATCCCGCTCTCCTATTTCGAGAAGGAGGCCGAGCATGTCGACGGCTTCGCCAAGGAGATGGCGGTCGTCACGCATCACCGGCTGATCCACAAGGACGGCAAGATGATCCCCGATCCCGAGGCGAAGCTGGAGGAGCCGCTGGTGGTGCGCCCCACTTCGGAGACGGTGATCGGCGCCGCGTTCAGCCGCTGGGTCCAGTCGTGGCGCGACCTGCCGGTGCTGATCAACCAGTGGGCGAACGTCGTCCGCTGGGAGATGCGCACCCGCATGTTCCTGCGCACCGCCGAGTTCCTCTGGCAGGAAGGGCACACCGCCCATGCCAGCGTGGAGGAAGCGCGCGAAGAGACGATGAAGATGCTCGAAGTCTATCGCAGCTTCGCCGAGGAATGCGTGGCGATGCCGGTGATCGCCGGCGAGAAGCCCGAGAATGAGCGCTTCCCCGGGGCGGTCTCGACCTATTCGATTGAGGCGATGATGCAGGACGGCAAGGCGCTCCAGGCGGGCACCTCGCACTTCCTCGGCACCACCTTCTCGAGCGCGCAGGACATCAAGTTCCAGAATTCGGAGGGCCAGCTCGAGCTGGCCCAGACGACGAGCTGGGGCATGTCGACCCGCATGATCGGCGGCCTGATCATGACGCATGGCGACGATGACGGCCTGCGCGTGCCGCCTCGCGTCGCGCCCTGGCAGGTGGTGATCGTGCCGATGCTGCGCGACAATGACGACGACGCCGCGCTGATCGACTATTGCAAGGGCATCCAGCAGGAACTGGCGCGGCAATATGCGTTCGGCGAGCCCGTTCGCGCGCTGCTCGATCTGCGCGCCGCCAAGGCGGTCACCAAGCGTTGGGGCTGGATCAAGAAGGGGGCGCCGCTCGTCGTCGAGGTCGGCGGGCGCGACATGGCCGGCGGCAACGTCTCGGTCACCGTCCGCACCGACCTGTACAAGGAGGACGGCAAGCTCAATTCGGCCATCGTTGCGCGCGACGCGTTCCTCGCCGAGGCCATCGGCCGGCTCGAAGCGGTGCAGAAGGCGCTGTACGATGAAGCCAAGGCGCGCACCGATGCGAACATCGTCCGCGACGTCGCCGACTTTGCCGGGCTGGAGAGCTATTTCGAGGGCGCGGGCAAGTTCCCCGGCTGGGTCGAGGTCGAATGGGCCAGGCCGAGCGGCAACGTGCCGAACGATGCGGCGCCCGCCGCCGGCACCTGCATCTTCACCGGCGCGCCGGCGGTCGAGCGCATCCTGGTGGCGCGTGCGTATTGA
PROTEIN sequence
Length: 493
MIKHALNVTREANFAEWYQTVITEADMAEESGVRGCMVIRPWGYGIWERIQRLLDDRIKATGHENCYFPLFIPLSYFEKEAEHVDGFAKEMAVVTHHRLIHKDGKMIPDPEAKLEEPLVVRPTSETVIGAAFSRWVQSWRDLPVLINQWANVVRWEMRTRMFLRTAEFLWQEGHTAHASVEEAREETMKMLEVYRSFAEECVAMPVIAGEKPENERFPGAVSTYSIEAMMQDGKALQAGTSHFLGTTFSSAQDIKFQNSEGQLELAQTTSWGMSTRMIGGLIMTHGDDDGLRVPPRVAPWQVVIVPMLRDNDDDAALIDYCKGIQQELARQYAFGEPVRALLDLRAAKAVTKRWGWIKKGAPLVVEVGGRDMAGGNVSVTVRTDLYKEDGKLNSAIVARDAFLAEAIGRLEAVQKALYDEAKARTDANIVRDVADFAGLESYFEGAGKFPGWVEVEWARPSGNVPNDAAPAAGTCIFTGAPAVERILVARAY*