ggKbase home page

SCNpilot_expt_500_bf_scaffold_3719_30

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(22504..23139)

Top 3 Functional Annotations

Value Algorithm Source
protease n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DE154F similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 209.0
  • Bit_score: 266
  • Evalue 2.00e-68
FIG056164: rhomboid family serine protease {ECO:0000313|EMBL:CCW19348.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 206.0
  • Bit_score: 213
  • Evalue 2.80e-52
rhomboid-family protein similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 206.0
  • Bit_score: 191
  • Evalue 3.40e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGGATTTGCGCCGGATTACGGCCACGTCCTGGATCGTGCTGGTCACGGTCCTGGTCAGTCTGTTCGTGCTGTTCACGCATCGCGAGATCGAAGCTGCCGTGCTCGGCGGCTTCATTCCCGCGCGCCTGACCGGTACGGTCGATACGCAAGGGCTCACCATGGTCCCGGCGTTGCTGACTCCGCTCAGCGCGACGCTGCTCCATGCCGGCCTGTTCCATCTCGGCATGAATATCCTGATGCTCGCCTATACGGGCCGGGAGACGGAGAAGGCGATCGGGCCCTGGGGCGTGCTGATCCTCTATCTGGTGGGCGCCTATGCTGCGGCGGGCGTGCAGTGGCTGGCCGATCCGCAGTCGGTACGCCCGATGATCGGCGCGAGCGGCGCGGCTTCCGCGATCGTCGGTGCCTATTCGCTGCTCTATGGCCGCTCGCGCGCCAAGCCGATCGGGCCCATTCCGGCACGCGCGGTGCACGTCGCATGGCTCGCCGCCGCCTGGGTGGCGATCAACCTGATGACCGGGCTGGCATTCCAGGCCGCGAATGTGGGAATTGCCGCCGCCGCGCATATCGGCGGCTTCGCGGCCGGACTGATATTGGCCCGGCCGCTTTTCCAGTGGAACTGGCGCAAGGCCTGA
PROTEIN sequence
Length: 212
MDLRRITATSWIVLVTVLVSLFVLFTHREIEAAVLGGFIPARLTGTVDTQGLTMVPALLTPLSATLLHAGLFHLGMNILMLAYTGRETEKAIGPWGVLILYLVGAYAAAGVQWLADPQSVRPMIGASGAASAIVGAYSLLYGRSRAKPIGPIPARAVHVAWLAAAWVAINLMTGLAFQAANVGIAAAAHIGGFAAGLILARPLFQWNWRKA*