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SCNpilot_expt_500_bf_scaffold_3910_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(3474..3809)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecN n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F3D08F similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 111.0
  • Bit_score: 186
  • Evalue 1.40e-44
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 109.0
  • Bit_score: 184
  • Evalue 9.70e-44
DNA repair protein RecN similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 111.0
  • Bit_score: 178
  • Evalue 1.60e-42

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGAAGGTGGCGCTGGCCGAGGAGGGCGGGGCGCGGACGCTGATCTTCGACGAGATCGATCGCGGGGTTGGCGGCGCGGTGGCGAGTGCCATTGGCGAGCGGCTGGCCCGGCTGGCGGATACGGCACAGCTGCTGGTGGTGACGCACAGCCCGCAGGTGGCGGCGCGCGGCGCTCGCCATCTGCTGATCGCCAAGAGCCATGACGGGACGGTCACGCGCACCGGAGTCACGCCGCTCGATGCGGCCGCGCGCCGCGAGGAGATCGCGCGCATGCTCTCCGGCGCGGAGATCACCGACGAGGCGCGGGCACAGGCCGAGCGGCTGATCGCGGCCTAG
PROTEIN sequence
Length: 112
MKVALAEEGGARTLIFDEIDRGVGGAVASAIGERLARLADTAQLLVVTHSPQVAARGARHLLIAKSHDGTVTRTGVTPLDAAARREEIARMLSGAEITDEARAQAERLIAA*