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SCNpilot_expt_500_bf_scaffold_3910_22

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(14841..15827)

Top 3 Functional Annotations

Value Algorithm Source
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 328.0
  • Bit_score: 578
  • Evalue 5.20e-162
class II fumarate hydratase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2] similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 326.0
  • Bit_score: 480
  • Evalue 3.30e-133
fumarate hydratase n=1 Tax=Sphingomonas elodea RepID=UPI0002632197 similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 328.0
  • Bit_score: 587
  • Evalue 6.10e-165

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGGCGCAGTCGTCGAACGATTCGTTCCCGACCGCGCTGCACATCGCCGCCGCCCGCGCGGTGACGCTGAAGCTCTACCCGGCGCTCGACCGGCTGCACGCTTCGATCGAGGCCAAGGTCAAGGCCTGGGATCACATCGTCAAGATCGGCCGCACGCACCTGCAGGATGCGACGCCGCTGACGCTGGGCCAGGAATTCTCGGGCTATGCCGCGATGCTGGAGTCGGCCAGGGCGCGCTTCGCCTCGGTGCTCGATCTCGACATCTTCAAGCTGGCGCTGGGCGGCACCGCCGTCGGCACCGGGCTCAACGCCCCTCCGGGCTATGCCGAGGACGTGGCGGCCGAGATCGCCAGGATCACCGGCCTGCCCTTCGTCTCCGCGCCCAACAAGTTCGAGGCGCTGGCGACCAAGGACCAGCTGGTCAACCTGTCGGGCACCTGCAACACGCTGGCCGTTTCGCTGACCAAGATCGCCAACGACATCCGCCTGCTCGGCAGCGGCCCGCGCTCGGGTCTGGGCGAGCTCGACCTGCCGGCCAACGAGCCGGGCAGCTCGATCATGCCGGGCAAGGTCAACCCGACCCAGAGCGAATCGCTGACGATGGTCGCGGCGCAGGTGATCGGCAACCACATGGCGGTCACCGTCGGCGGCATGCAGGGCCATTTCGAGCTGAACGTGTTCAAGCCGTTGATCGGCTCGAACGTGCTGCGCTCGATCGAGCTGATGTCGGTCGGCATGGTGAGCTTCGCCGAGCGCGCGGTGGACGGCGCCAAGGCGAACGAGGCGCGGATCAAGGAGCTGGTCGATCGCTCGCTGATGCTGGTGACCGCGCTGGCGCCGGCGATCGGCTATGACAACGCCGCCAAGATCGCCAAGAACGCGCACGAGAAGGGGCTGACGCTCAAGGAGAGCGGGCTGGCGCTGGGTCTCGTCGACGAGGCCACGTTCGACCAATATGTGCGGCCCGAGACGATGATCGGGCGGTGA
PROTEIN sequence
Length: 329
MAQSSNDSFPTALHIAAARAVTLKLYPALDRLHASIEAKVKAWDHIVKIGRTHLQDATPLTLGQEFSGYAAMLESARARFASVLDLDIFKLALGGTAVGTGLNAPPGYAEDVAAEIARITGLPFVSAPNKFEALATKDQLVNLSGTCNTLAVSLTKIANDIRLLGSGPRSGLGELDLPANEPGSSIMPGKVNPTQSESLTMVAAQVIGNHMAVTVGGMQGHFELNVFKPLIGSNVLRSIELMSVGMVSFAERAVDGAKANEARIKELVDRSLMLVTALAPAIGYDNAAKIAKNAHEKGLTLKESGLALGLVDEATFDQYVRPETMIGR*