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SCNpilot_expt_500_bf_scaffold_4851_11

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(10198..12051)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y2S1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 612.0
  • Bit_score: 354
  • Evalue 2.80e-94
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 605.0
  • Bit_score: 327
  • Evalue 8.80e-87
  • rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 587.0
  • Bit_score: 611
  • Evalue 1.80e-171

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Taxonomy

R_Sphingopyxis_65_20 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1854
ATGGAACAGGCACCGCGACAGCAAGGCCCGGCATCTCCGCCAGCGGAGCCGAACGGTCTCGGCGCGCAGGCGCTTGGCGAAGCCCTGCAGCATGCCATGGGGCTGGCACGCGGCGGCCAGGCCGGAGCGGCCGAGACCATTCTCCTGCATGTGCTGGACCTCGCTCCCGAGAATCCCGACGCGCTTCAGCTGCTCGGCATGATCGCGCGACGGGCAGGCCGGCACGAGGCGGCGGTAGCGCTCTTCCGCCGCTCGCTCGCGGCCGCTCCGGACCAGCCCCATGTGCACAACAATCTCGGGAACAGCCTTGGCGACCTGGGCGACTCCGCCGGCGCGGCGCAAGCCTATCGCGACGCGCTGGCGCTCGCGCCTGCCTATGACGAGGCCCGGGTGAACCTGGCGATCGCCCTGCTCGCTGCCGGGGAACCGCGATCCGCCTGCGAGACGCTCGCCCCGCTGCTGCGCCGCGATCCGCGCAACGCACGCGCCTGGGCCACGCTCGGCCAGGCCCGGCGGGAGCGTGGCGAGCTCGATCACGCCATCGCCGCCTTCCGCACCGCGCTCGCATTGCGGCCCGACCATGTCGCAACGCTGCTCAATCTGGGCGTTGTGCTGCGCCTTGCCGGTTGGCCGGAAGAAGCCTTGCCCCTGCTCGCCCGCGCGGCCGAGATCGATCCGGCCAATCCGGATATCGCCTATGTCCTCGGCCATTGCCTGCAGGATCTGGGCCGGGTCGACGCCGCCATCGTCTCCTATGAACGCGCGATCACCCTGCGCCCCGCCGATCGCGCCGCACATGAATCGCTCAACAACCTGTTGTGGCGGCAGGGCCGCGGCGCAGCCTGGCTGGCCAGCTATCGCGCCGCGCTGGCCCGCTTTCCGGGCAATGAAGGGCTGCTCTGCGACCTGGCCGACCGGCTGCTGCTCGCCGGGGACGCGGCAGGTGCCGCGGCGCTGCTCGCGCCGCACGCCGATCGCGCCGGACCGGAACTGCGCTGCCAGTTCGGCCGGGCCCGCTGGTCGCTGGGCGAAGCGCAGGCCGCGCTCCTGGAGTTCGATGCCGCGCTCGCCCGCGATCCCGGTTTCGCCCCCGCCGCGCGCGAAGCTGCCCGATCGCACATCATCCTCGATCGCCCCGCCGAAGCGCTGGCCCGGCTGGAGCCGCTGCTCGCCGCCGATCCGTTCGACCAGCAGGCGCTCGCGCTTCAGGGCCTCGCCTGGCGCTTCACCGGCGATCCGCGCGATGCCTGGCTGAACGATGCCGAACGTCTCGCCTCGGCGAGCCGGCTGGCTCCGCCCGATGGCGACGCCGCCGGCTTCAACGCGCGGCTCGACGCGGCGCTCACCGCGCGTCACCGCGACCAGCAGCAGCCGCTCGGGCAGACGCTGCGCGGCGGCACCCAGACCAGCGACGACCTGTTCGCCCTGCCCGATCCGATGATCGCCGCGGTGCGCGCGATGATCGAGGCGCAGGTCCGCCGCTGGCTAGCCGCACTGCCCGCAGACGCGGAGCACCCTTTCCTTCGCCGCAACACCGGCCGGTTCGCCTTTTCCGGCTCCTGGTCGGTGCGGCTGCGCCGCGCCGGCTTCCACGAGAACCACATCCATCCCCAGGGCTGGATCAGCGCCTGCTATTATGTCGCCCTGCCCCAGGCGGTCGATTACCACCGCCAGGGCTGGCTCAAGTTCGGCGAGAGCGGGCTTCGCCTGGGGGAACGCGAACGGATCGCCCGCATGATCCGGCCCGAGCCGGGCCTGCTCGTGCTGTTCCCTTCCTATTTCTACCACGGGACGGTGCCGTTCGAGGATTCCGGCCACCGCACCACCATCGCCTTCGACATCGTGCCGGCATGA
PROTEIN sequence
Length: 618
MEQAPRQQGPASPPAEPNGLGAQALGEALQHAMGLARGGQAGAAETILLHVLDLAPENPDALQLLGMIARRAGRHEAAVALFRRSLAAAPDQPHVHNNLGNSLGDLGDSAGAAQAYRDALALAPAYDEARVNLAIALLAAGEPRSACETLAPLLRRDPRNARAWATLGQARRERGELDHAIAAFRTALALRPDHVATLLNLGVVLRLAGWPEEALPLLARAAEIDPANPDIAYVLGHCLQDLGRVDAAIVSYERAITLRPADRAAHESLNNLLWRQGRGAAWLASYRAALARFPGNEGLLCDLADRLLLAGDAAGAAALLAPHADRAGPELRCQFGRARWSLGEAQAALLEFDAALARDPGFAPAAREAARSHIILDRPAEALARLEPLLAADPFDQQALALQGLAWRFTGDPRDAWLNDAERLASASRLAPPDGDAAGFNARLDAALTARHRDQQQPLGQTLRGGTQTSDDLFALPDPMIAAVRAMIEAQVRRWLAALPADAEHPFLRRNTGRFAFSGSWSVRLRRAGFHENHIHPQGWISACYYVALPQAVDYHRQGWLKFGESGLRLGERERIARMIRPEPGLLVLFPSYFYHGTVPFEDSGHRTTIAFDIVPA*