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SCNpilot_expt_500_bf_scaffold_4851_20

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(19638..20129)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V4I1_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 159.0
  • Bit_score: 183
  • Evalue 1.70e-43
MarR family transcriptional regulator {ECO:0000313|EMBL:AJP71671.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 159.0
  • Bit_score: 255
  • Evalue 5.00e-65
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 159.0
  • Bit_score: 183
  • Evalue 5.50e-44

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGACTCGCACCGCCTTCCTGCGCGAAAAGCATGACGGCGCGCTCGACGATCGCGGCAGCGTGCGGCTGTGGCTGCGGCTCCTCACCTGCACCACGGTGATCGAGAAGCGGCTGAAGCGCGGCTTTGCCGACGGATACGACATCACCCTGCCCCGCTTCGACGTGATGGCGGCGCTCGACCGGCATCCCGAGGGGATGACGATGGGCCAGCTCTCCCAGGCGCTGCTCGTCTCGAACGGCAATGTCACCGGCGTCGTCCAGGCGCTGGTGCGCGACCGCTATGTGAGCCTCGCGCCCTCGCCCACCGACGGCCGCTCCTCGGTTGCCCGCCTGACCCAATTGGGGCGCGAATGCTTCGCCGGGCTCGCCGAGGCGCATCATGCATGGATCGAAGCGATGCTGGCCGGGCTGGGCCGCGAGGAACGCGGCCAGCTTCACCAGCTTCTGGGCGTGCTCAAGGACTCGCTCGCTGCCGATGGGGAGAAGGAATGA
PROTEIN sequence
Length: 164
VTRTAFLREKHDGALDDRGSVRLWLRLLTCTTVIEKRLKRGFADGYDITLPRFDVMAALDRHPEGMTMGQLSQALLVSNGNVTGVVQALVRDRYVSLAPSPTDGRSSVARLTQLGRECFAGLAEAHHAWIEAMLAGLGREERGQLHQLLGVLKDSLAADGEKE*