ggKbase home page

SCNpilot_expt_500_bf_scaffold_12293_15

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 11302..11919

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 204.0
  • Bit_score: 215
  • Evalue 1.60e-53
Diaminopimelate decarboxylase {ECO:0000313|EMBL:ADY12202.1}; EC=4.1.1.20 {ECO:0000313|EMBL:ADY12202.1};; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 204.0
  • Bit_score: 215
  • Evalue 7.30e-53
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003755E61 similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 205.0
  • Bit_score: 246
  • Evalue 2.10e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphaerochaeta globosa → Sphaerochaeta → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 618
ATGAAACTCACCCGCAGCCTATTGGATAGGATCGCCGTCGAGCACGGGTCTGCCTTCTACATGCTCGACCCTGAGCGGTTCGAGGAGTATTTCACCAGGCTAACCGTCGCCTTCCGGGCCTATTATCCGAAGACGACGATCGCCTACTCCTACAAGACCAACTATATTCCGCGCTTCTGCCAGATCGTCGACCGGCTCGGCGGTTTCGCCGAGGTCGTGTCGAGCATGGAAGTTGAGGTCGCCGCACGTGCGGGCATCGATCCGCCCAAGGTGTTCTTCAACGGCCCGTTCAAGGAAATCGAGCATATCGAGGGCGTCCTTACGAGCGGGGGCGTGGTCAACGCGGACTCGCTCGAGGAATTGAAGCTGATCCTGCAGGTTGCGAAGGCGCATCCTGAGCAGCAGCTCCGTATCGGACTGCGCCTGAATTTCGACGTCGAAGACGGCGTCCTATCCCGCTTCGGCTTCGATGCCGGCGGCGACGAGTTTCGTGTCGCGCGCGAATGGATCGCCGATGCATCCAATCTGCGGCTTATCGGCTTGCACTGCCATTTCGCTACCCGCAGCCTAGCGTGCTGGCAGAACCGAACTCGGGGCATGATCGAGATTCTCGACGGC
PROTEIN sequence
Length: 206
MKLTRSLLDRIAVEHGSAFYMLDPERFEEYFTRLTVAFRAYYPKTTIAYSYKTNYIPRFCQIVDRLGGFAEVVSSMEVEVAARAGIDPPKVFFNGPFKEIEHIEGVLTSGGVVNADSLEELKLILQVAKAHPEQQLRIGLRLNFDVEDGVLSRFGFDAGGDEFRVAREWIADASNLRLIGLHCHFATRSLACWQNRTRGMIEILDG