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SCNpilot_expt_500_bf_scaffold_461

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_461_1
unknown

Not on your lists

2..187
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_461_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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410..1135
DNA (726bp) protein (242aa)
acetoacetyl-CoA reductase; K00023 acetoacetyl-CoA reductase [EC:1.1.1.36]
acetoacetyl-CoA reductase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000368AA56
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:AIL13023.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_461_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1166..1519
DNA (354bp) protein (118aa)
thioredoxin n=1 Tax=Acetobacter aceti RepID=UPI00022603FE
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
trxA; thioredoxin; K03671 thioredoxin 1
SCNpilot_expt_500_bf_scaffold_461_4
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1596..3413
DNA (1818bp) protein (606aa)
Poly(3-hydroxyalkanoate) synthetase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] rbh
Poly(3-hydroxyalkanoate) synthetase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z2B1_9PROT rbh
Poly(3-hydroxyalkanoate) synthetase {ECO:0000313|EMBL:EME68450.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
SCNpilot_expt_500_bf_scaffold_461_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3422..5614
DNA (2193bp) protein (731aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Cache sensor hybrid histidine kinase n=1 Tax=uncultured bacterium RepID=K2EL44_9BACT rbh
ATPase
SCNpilot_expt_500_bf_scaffold_461_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5694..7481
DNA (1788bp) protein (596aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Xaa-Pro aminopeptidase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H2E0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL13026.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_461_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7493..8098)
DNA (606bp) protein (202aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase IM40_05135 {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
malonic semialdehyde reductase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A942
malonic semialdehyde reductase
SCNpilot_expt_500_bf_scaffold_461_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8197..8841
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13028.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_461_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9250..9834
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13029.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_461_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9890..11155)
DNA (1266bp) protein (422aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11]
Enolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=ENO_PARL1
SCNpilot_expt_500_bf_scaffold_461_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11191..11517)
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13031.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_461_12
unknown

Not on your lists

11672..12064
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_461_13
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

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12412..13272
DNA (861bp) protein (287aa)
Predicted protein (Fragment) n=1 Tax=Naegleria gruberi RepID=D2V8Y3_NAEGR
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EFC46770.1}; Flags: Fragment;; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
SCNpilot_expt_500_bf_scaffold_461_14
unknown

Not on your lists

comp(13308..14123)
DNA (816bp) protein (272aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_461_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14396..14644)
DNA (249bp) protein (83aa)
XRE family transcriptional regulator {ECO:0000313|EMBL:AIL13032.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Probable transcriptional regulator id=4408193 bin=GWF2_TM6_28_16 species=GWF2_TM6_27_16 genus=GWF2_TM6_27_16 taxon_order=GWF2_TM6_27_16 taxon_class=GWF2_TM6_27_16 phylum=TM6 tax=GWF2_TM6_28_16 organism_group=TM6
hypothetical protein; K07727 putative transcriptional regulator
SCNpilot_expt_500_bf_scaffold_461_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14655..15224)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Serratia fonticola AU-AP2C RepID=U2LXM4_SERFO
Uncharacterized protein {ECO:0000313|EMBL:AIL13033.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_461_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15548..15991)
DNA (444bp) protein (148aa)
Conserved protein of DIM6/NTAB family n=1 Tax=Variovorax sp. CF313 RepID=J2K3B3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AIL13036.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
monooxygenase
SCNpilot_expt_500_bf_scaffold_461_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16027..16749)
DNA (723bp) protein (241aa)
yqiZ; hypothetical protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] rbh
High affinity arginine ABC transporter ATP-binding protein ArtR n=5 Tax=Bacillus RepID=Q65HL6_BACLD rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIL13037.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_461_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16742..17455)
DNA (714bp) protein (238aa)
arginine ABC transporter permease n=1 Tax=Brevibacillus laterosporus RepID=UPI00037BD6CA
Arginine ABC transporter permease {ECO:0000313|EMBL:AIL13038.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
amino acid ABC transporter membrane protein, PAAT family
SCNpilot_expt_500_bf_scaffold_461_20
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17636..17806
DNA (171bp) protein (57aa)
Flp pilus assembly protein, pilin Flp {ECO:0000313|EMBL:ETY78838.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
SCNpilot_expt_500_bf_scaffold_461_21
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17872..18144)
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GZZ6_9PROT
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:AIL13039.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta
SCNpilot_expt_500_bf_scaffold_461_22
unknown

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18253..18378
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_461_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18365..18679)
DNA (315bp) protein (105aa)
Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GT66_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL13040.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
septum formation initiator
SCNpilot_expt_500_bf_scaffold_461_24
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18780..21974)
DNA (3195bp) protein (1065aa)
peptidase S41; K08676 tricorn protease [EC:3.4.21.-] rbh
Peptidase S41 n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS53_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AIL13041.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_461_25
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22185..22967)
DNA (783bp) protein (261aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13043.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Metallo-beta-lactamase superfamily id=4838452 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
metallo-beta-lactamase superfamily; K06167 PhnP protein
SCNpilot_expt_500_bf_scaffold_461_26
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22954..23754)
DNA (801bp) protein (267aa)
TatD family hydrolase; K03424 TatD DNase family protein [EC:3.1.21.-]
TatD family hydrolase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K067_9PROT
LuxR family transcriptional regulator {ECO:0000313|EMBL:AIL13044.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_461_27
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23741..24811)
DNA (1071bp) protein (357aa)
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
ATPase involved in DNA replication n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4H2_MAGSA
Uncharacterized protein {ECO:0000313|EMBL:AIL13045.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_461_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24811..25437)
DNA (627bp) protein (209aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Thymidylate kinase n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FXQ9_PHAMO
tmk; thymidylate kinase
SCNpilot_expt_500_bf_scaffold_461_29
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25440..26576)
DNA (1137bp) protein (379aa)
D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] rbh
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000379AC2E rbh
Uncharacterized protein {ECO:0000313|EMBL:AIL13047.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_461_30

Not on your lists

comp(26582..27628)
DNA (1047bp) protein (349aa)
Rare lipoprotein A id=4940931 bin=GWC2_Alphaproteobacteria_42_16 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Rare lipoprotein A {ECO:0000313|EMBL:EKE09714.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
lipoprotein; K03642 rare lipoprotein A
Displaying items 1-30 of 31 in total

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