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SCNpilot_expt_500_bf_scaffold_670

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_670_1
unknown

Not on your lists

3..212
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_670_2
unknown

Not on your lists

430..1845
DNA (1416bp) protein (472aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_670_3
unknown

Not on your lists

1818..2285
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_670_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2358..2768)
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13372.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_670_5
unknown

Not on your lists

comp(2771..3190)
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_670_6
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3429..3722
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Streptococcus salivarius (strain JIM8777) RepID=F8LMJ9_STRE8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB94569.1}; TaxID=347253 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius (strain JIM8777).;"
SCNpilot_expt_500_bf_scaffold_670_7
GWC2_Verrucomicrobia_42_7_curated, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

4031..5002
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EMP6_9GAMM
hypothetical protein
Tax=GWC2_Verrucomicrobia_42_7_curated
SCNpilot_expt_500_bf_scaffold_670_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5017..5703)
DNA (687bp) protein (229aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Lysine--tRNA ligase n=1 Tax=Clostridium sp. CAG:813 RepID=R7MHI5_9CLOT
SCNpilot_expt_500_bf_scaffold_670_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6575..7564)
DNA (990bp) protein (330aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
asd1; Aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
Aspartate-semialdehyde dehydrogenase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9Q3_AZOL4
SCNpilot_expt_500_bf_scaffold_670_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7668..9011)
DNA (1344bp) protein (448aa)
Patatin n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LT05_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:AIL13377.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Patatin
SCNpilot_expt_500_bf_scaffold_670_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9200..10318)
DNA (1119bp) protein (373aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ald; hypothetical protein; K00259 alanine dehydrogenase [EC:1.4.1.1] rbh
Alanine dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JZ31_9PROT rbh
SCNpilot_expt_500_bf_scaffold_670_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10396..11559)
DNA (1164bp) protein (388aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13379.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Putative uncharacterized protein id=4896247 bin=GWC2_Alphaproteobacteria_42_16 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
SCNpilot_expt_500_bf_scaffold_670_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11561..15823)
DNA (4263bp) protein (1421aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13380.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein COdytL_02105 id=4896248 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
hypothetical protein; K11891 type VI secretion system protein ImpL
SCNpilot_expt_500_bf_scaffold_670_14
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15833..16645)
DNA (813bp) protein (271aa)
Putative Uncharacterized protein conserved in bacteria id=4896249 bin=GWC2_Alphaproteobacteria_42_16 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein; K11892 type VI secretion system protein ImpK
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_expt_500_bf_scaffold_670_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16671..18011)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EJN1_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AIL13381.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_670_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18033..18641)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ELK8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL13382.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K11918 type VI secretion system protein
SCNpilot_expt_500_bf_scaffold_670_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18649..19722)
DNA (1074bp) protein (358aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13383.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_670_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19916..20839)
DNA (924bp) protein (308aa)
ribokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15]
Uncharacterized protein {ECO:0000313|EMBL:AIL13384.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Ribokinase id=2532126 bin=GWC2_Alphaproteobacteria_42_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
SCNpilot_expt_500_bf_scaffold_670_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20929..21381
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13385.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_670_20
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21411..21971)
DNA (561bp) protein (187aa)
DnaJ-class molecular chaperone n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W0A7_MAGSA
Uncharacterized protein {ECO:0000313|EMBL:AIL13386.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
DnaJ-class molecular chaperone
SCNpilot_expt_500_bf_scaffold_670_21
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21975..22298)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA015-N04 RepID=UPI000360B9D1
BolA family transcriptional regulator {ECO:0000313|EMBL:AIL65672.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
bolA; Protein bolA
SCNpilot_expt_500_bf_scaffold_670_22
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22302..23570)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J1P5_9PROT rbh
Membrane protein {ECO:0000313|EMBL:AIL13387.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_670_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23603..24478)
DNA (876bp) protein (292aa)
Putative sugar phosphatase (HAD superfamily) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AHE8_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AIL13388.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative sugar phosphatase (HAD superfamily)
SCNpilot_expt_500_bf_scaffold_670_24
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24482..25399)
DNA (918bp) protein (306aa)
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
protein-export membrane protein SecF id=4468768 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
protein-export membrane protein SecD; K12257 SecD/SecF fusion protein
SCNpilot_expt_500_bf_scaffold_670_25
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25445..26974)
DNA (1530bp) protein (510aa)
Protein translocase subunit SecD n=1 Tax=uncultured bacterium RepID=K2DTQ2_9BACT
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD
SCNpilot_expt_500_bf_scaffold_670_26
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26984..27445)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bartonella schoenbuchensis (strain DSM 13525 / NCTC 13165 / R1) RepID=E6YYI0_BARSR
Uncharacterized protein {ECO:0000313|EMBL:AIL13391.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
protein translocase subunit yajC; K03210 preprotein translocase subunit YajC
SCNpilot_expt_500_bf_scaffold_670_27

Not on your lists

comp(27525..28631)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI0003619309
Peptidase M23 {ECO:0000313|EMBL:EKE09224.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative peptidoglycan-binding LysM
SCNpilot_expt_500_bf_scaffold_670_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28658..29407)
DNA (750bp) protein (250aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
5'-nucleotidase SurE n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S9C8_PHAFV
surE; 5'-nucleotidase
SCNpilot_expt_500_bf_scaffold_670_29
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29404..30468)
DNA (1065bp) protein (355aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TAU0_9RHIZ
Displaying 29 items

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