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SCNpilot_expt_500_bf_scaffold_1139

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1139_1
unknown

Not on your lists

comp(24..119)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1139_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

628..1260
DNA (633bp) protein (211aa)
3'-5' exonuclease; K03684 ribonuclease D [EC:3.1.13.5]
3'-5' exonuclease n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I5A1_RHOVT
3'-5' exonuclease {ECO:0000313|EMBL:AIL12307.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1139_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1282..2310
DNA (1029bp) protein (343aa)
Arabinose 5-phosphate isomerase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AT16_AZOBR rbh
D-arabinose 5-phosphate {ECO:0000313|EMBL:AIL12308.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
kpsF; arabinose 5-phosphate isomerase rbh
SCNpilot_expt_500_bf_scaffold_1139_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2328..3017
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JNM0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL12309.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1139_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3007..3666
DNA (660bp) protein (220aa)
OstA-like family protein n=1 Tax=uncultured bacterium RepID=C5JBK0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL12310.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1139_6
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3678..4166
DNA (489bp) protein (163aa)
ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-]
ABC transporter ATP-binding protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037519C9
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM31647.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_expt_500_bf_scaffold_1139_7
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4156..4404
DNA (249bp) protein (83aa)
ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-]
ABC transporter, ATP-binding protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IW90_RHOCS
ABC transporter, ATP-binding protein, putative {ECO:0000313|EMBL:ACJ00564.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_expt_500_bf_scaffold_1139_8
unknown

Not on your lists

4556..6298
DNA (1743bp) protein (581aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1139_9
unknown

Not on your lists

6391..9180
DNA (2790bp) protein (930aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1139_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9329..9958
DNA (630bp) protein (210aa)
Na+/H+ antiporter NhaA n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BC60
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
sodium/proton antiporter, NhaA family
SCNpilot_expt_500_bf_scaffold_1139_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9961..10545
DNA (585bp) protein (195aa)
Na+/H+ antiporter NhaA n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BC60
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
nhaA; pH-dependent sodium/proton antiporter; K03313 Na+:H+ antiporter, NhaA family
SCNpilot_expt_500_bf_scaffold_1139_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10554..11198)
DNA (645bp) protein (215aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036B35F2
SCNpilot_expt_500_bf_scaffold_1139_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11510..12733
DNA (1224bp) protein (408aa)
bicyclomycin resistance protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225C1E7
Uncharacterized protein {ECO:0000313|EMBL:AIL12313.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
bicyclomycin resistance protein; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
SCNpilot_expt_500_bf_scaffold_1139_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12846..14051
DNA (1206bp) protein (402aa)
Lysine/cadaverine antiporter membrane protein CadB n=1 Tax=Patulibacter medicamentivorans RepID=H0E1B0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:AIL12314.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
adiC-B; arginine/agmatine antiporter; K03759 arginine:agmatine antiporter
SCNpilot_expt_500_bf_scaffold_1139_15
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14082..15425
DNA (1344bp) protein (448aa)
exonuclease VII large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 large subunit n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAV9_MAGSA
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_expt_500_bf_scaffold_1139_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15495..16370
DNA (876bp) protein (292aa)
Thioredoxin n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSP9_PARL1
Uncharacterized protein {ECO:0000313|EMBL:AIL12315.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
thioredoxin; K05838 putative thioredoxin
SCNpilot_expt_500_bf_scaffold_1139_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16380..17018
DNA (639bp) protein (213aa)
Peptidase S16 lon-like protein n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28VC2_JANSC
Uncharacterized protein {ECO:0000313|EMBL:AIL12316.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
peptidase S16, lon-like; K07157
SCNpilot_expt_500_bf_scaffold_1139_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17030..17221
DNA (192bp) protein (64aa)
UPF0434 protein TH2_01130 n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LJB8_9PROT
UPF0434 protein IM40_00355 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1139_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17178..17816)
DNA (639bp) protein (213aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12318.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1139_20
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17810..18481)
DNA (672bp) protein (224aa)
ccmA; cytochrome c biogenesis protein CcmA; K02193 heme exporter protein A [EC:3.6.3.41]
Heme ABC exporter, ATP-binding protein CcmA n=1 Tax=Escherichia coli 2845650 RepID=M8Y532_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AIL12319.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1139_21
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18482..18895)
DNA (414bp) protein (138aa)
mutT; mutator mutT protein; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
Mutator mutT protein n=2 Tax=Ketogulonicigenium vulgare RepID=E3F0B8_KETVY
Uncharacterized protein {ECO:0000313|EMBL:AIL12320.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1139_22
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18885..19619)
DNA (735bp) protein (245aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12321.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Predicted O-methyltransferase id=3959832 bin=GWC2_Alphaproteobacteria_42_16 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
methyltransferase small domain-containing protein
SCNpilot_expt_500_bf_scaffold_1139_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19733..20755
DNA (1023bp) protein (341aa)
Octaprenyl diphosphate synthase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F1A6_9PROT
Farnesyltranstransferase {ECO:0000313|EMBL:AIL12322.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ispB; octaprenyl diphosphate synthase
SCNpilot_expt_500_bf_scaffold_1139_24
unknown

Not on your lists

20828..20977
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1139_25
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22434..23018)
DNA (585bp) protein (195aa)
UPF0301 protein TH2_04378 n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LGS8_9PROT
UPF0301 protein IM40_00435 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K07735 putative transcriptional regulator
SCNpilot_expt_500_bf_scaffold_1139_26
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23074..24036
DNA (963bp) protein (321aa)
thiol:disulfide interchange protein DsbD; K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8]
COG4232: Thiol:disulfide interchange protein id=2744876 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Endolissoclinum faulkneri genus=Candidatus Endolissoclinum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_expt_500_bf_scaffold_1139_27

Not on your lists

24042..24794
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000372C3A5
Thiol:disulfide interchange protein DsbD {ECO:0000313|EMBL:EKE08909.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dsbD; thiol:disulfide interchange protein DsbD
SCNpilot_expt_500_bf_scaffold_1139_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


24837..25076
DNA (240bp) protein (80aa)
50S ribosomal protein L31 n=2 Tax=Phaeospirillum RepID=H8FQH2_PHAMO
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
SCNpilot_expt_500_bf_scaffold_1139_29
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25144..26079)
DNA (936bp) protein (312aa)
fbaB; Fructose-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FGF8_9BACT rbh
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:AIL12332.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1139_30
unknown

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26392..27339
DNA (948bp) protein (316aa)

This feature has no annotations

Displaying items 1-30 of 46 in total

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