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SCNpilot_expt_500_bf_scaffold_1276

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1276_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(299..832)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A9F7
Uncharacterized protein {ECO:0000313|EMBL:AIL13938.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ProP expression regulator
SCNpilot_expt_500_bf_scaffold_1276_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(987..1553)
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13468.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1276_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1605..2282)
DNA (678bp) protein (226aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13469.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1276_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3220..4098
DNA (879bp) protein (293aa)
LyrR family transcriptional regulator n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225C1F6
Uncharacterized protein {ECO:0000313|EMBL:AIL13471.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
LysR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_1276_5
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4361..5455
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACD0
Uncharacterized protein {ECO:0000313|EMBL:AIK95542.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1276_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5372..6244)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Burkholderia bryophila RepID=UPI00036984E2
Uncharacterized protein {ECO:0000313|EMBL:AIL13472.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K15270 S-adenosylmethionine uptake transporter
SCNpilot_expt_500_bf_scaffold_1276_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7036..7227
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UGY5_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:AIL13473.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1276_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7258..8340
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Fangia hongkongensis RepID=UPI00037893B5
Uncharacterized protein {ECO:0000313|EMBL:AIL13474.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
helicase
SCNpilot_expt_500_bf_scaffold_1276_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8449..10626)
DNA (2178bp) protein (726aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
recD; exodeoxyribonuclease V alpha chain; K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] rbh
Putative exodeoxyribonuclease V alpha chain n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HC74_GLUDA rbh
SCNpilot_expt_500_bf_scaffold_1276_10
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10912..11655)
DNA (744bp) protein (248aa)
DNA replication protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z465_9GAMM
DNA replication protein {ECO:0000313|EMBL:EIC21151.1}; Flags: Precursor;; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
transposase
SCNpilot_expt_500_bf_scaffold_1276_11
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11648..12661)
DNA (1014bp) protein (338aa)
Integrase family protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z464_9GAMM
Integrase family protein {ECO:0000313|EMBL:EIC21150.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
integrase catalytic subunit
SCNpilot_expt_500_bf_scaffold_1276_12
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12727..13134)
DNA (408bp) protein (136aa)
hypothetical protein n=2 Tax=unclassified Zetaproteobacteria RepID=UPI00035CC9DD
integrase catalytic subunit
Integrase family protein {ECO:0000313|EMBL:EIC23272.1}; Flags: Fragment;; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
SCNpilot_expt_500_bf_scaffold_1276_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13202..13354)
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13476.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1276_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13356..13613)
DNA (258bp) protein (86aa)
Hypothetical UPF0156 family protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QLK9_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:AIL13477.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
addiction module antidote protein
SCNpilot_expt_500_bf_scaffold_1276_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13985..14506
DNA (522bp) protein (174aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13478.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1276_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14549..14773)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13479.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1276_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14874..15122)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13480.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1276_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15368..18898
DNA (3531bp) protein (1177aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13481.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
conjugal transfer relaxase TraA id=4935065 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
conjugal transfer relaxase TraA
SCNpilot_expt_500_bf_scaffold_1276_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19038..19667
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12608.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1276_20
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19865..21163
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B4A0 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIK96637.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1276_21
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21219..21830
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B4A1
Uncharacterized protein {ECO:0000313|EMBL:AIK96639.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1276_22
unknown

Not on your lists

comp(21849..22421)
DNA (573bp) protein (191aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1276_23
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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comp(22503..23366)
DNA (864bp) protein (288aa)
DNA methylase N-4/N-6 (EC:2.1.1.-)
hypothetical protein n=1 Tax=Bacillus sp. ZYK RepID=UPI0002D4983A
Tax=RBG_13_Planctomycetes_50_24_curated
SCNpilot_expt_500_bf_scaffold_1276_24
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23379..23933)
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12861.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Displaying 24 items

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