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SCNpilot_expt_500_bf_scaffold_1553

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1553_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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119..976
DNA (858bp) protein (286aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13558.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1553_2
Holospora elegans, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1078..1644
DNA (567bp) protein (189aa)
phosphoglycerate mutase family protein; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
phosphoglycerate mutase family protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B4D0
Putative phosphatase PhoE {ECO:0000313|EMBL:GAJ46722.1}; TaxID=1427503 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora elegans E1.;"
SCNpilot_expt_500_bf_scaffold_1553_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1712..2101
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Rickettsia rhipicephali (strain 3-7-female6-CWPP) RepID=H8KJ41_RICR3
Uncharacterized protein {ECO:0000313|EMBL:AIL13559.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1553_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2101..2676
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Holospora obtusa RepID=UPI0003AEDAAD
NUDIX hydrolase {ECO:0000313|EMBL:AIL13560.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1553_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2685..4610)
DNA (1926bp) protein (642aa)
hypothetical protein n=1 Tax=Fischerella thermalis RepID=UPI000368565C
Uncharacterized protein {ECO:0000313|EMBL:AIL13561.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1553_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4782..5174
DNA (393bp) protein (131aa)
DNA polymerase V n=1 Tax=Sphingobium xenophagum RepID=UPI000382F187
Uncharacterized protein {ECO:0000313|EMBL:AIL13842.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1553_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5403..7538
DNA (2136bp) protein (712aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13562.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein COdytL_08996 id=4908546 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_expt_500_bf_scaffold_1553_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7538..8668
DNA (1131bp) protein (377aa)
Tetratricopeptide repeat protein n=1 Tax=uncultured bacterium RepID=K2EXY7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL13563.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1553_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9109..9570
DNA (462bp) protein (154aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12750.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1553_10
unknown

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9798..9983
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1553_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10122..11243)
DNA (1122bp) protein (374aa)
Bacterial cell division membrane protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM59_9PROT rbh
Cell wall shape-determining protein {ECO:0000313|EMBL:AIL13417.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rodA; rod shape-determining protein RodA; K05837 rod shape determining protein RodA rbh
SCNpilot_expt_500_bf_scaffold_1553_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11250..11561)
DNA (312bp) protein (104aa)
magnesium transporter MgtC n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AEA2
Magnesium transporter MgtC {ECO:0000313|EMBL:AIL13416.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
SCNpilot_expt_500_bf_scaffold_1553_13
unknown

Not on your lists

comp(11696..11842)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1553_14
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11919..12521
DNA (603bp) protein (201aa)
Redoxin domain-containing protein n=1 Tax=Acidiphilium sp. PM RepID=F7SAI6_9PROT
Redoxin domain-containing protein {ECO:0000313|EMBL:EGO93806.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
thiol:disulfide interchange protein
SCNpilot_expt_500_bf_scaffold_1553_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12529..12741
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JYJ0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE70310.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1553_16
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12753..14405
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INZ3_RHOCS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACI99413.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_expt_500_bf_scaffold_1553_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14417..14905
DNA (489bp) protein (163aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Thioredoxin reductase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2MBA8_9PROT
trxB; thioredoxin reductase, FAD/NAD(P)-binding
SCNpilot_expt_500_bf_scaffold_1553_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14889..15305
DNA (417bp) protein (139aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
trxB; thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KMY6_9PROT
SCNpilot_expt_500_bf_scaffold_1553_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15328..17973
DNA (2646bp) protein (882aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] rbh
Valyl-tRNA synthetase (Valine--tRNA ligase) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F1Z6_9PROT rbh
SCNpilot_expt_500_bf_scaffold_1553_20
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18226..19167
DNA (942bp) protein (314aa)
ABC transporter, periplasmic substrate-binding protein id=4886533 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein; K01989 putative ABC transport system substrate-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_expt_500_bf_scaffold_1553_21
unknown

Not on your lists

comp(19191..19334)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1553_22
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19757..21061
DNA (1305bp) protein (435aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13413.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
major facilitator family transporter id=4018955 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1553_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21071..21994)
DNA (924bp) protein (308aa)
Glr4409 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7ND27_GLOVI
Uncharacterized protein {ECO:0000313|EMBL:AIL13412.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K05794 tellurite resistance protein TerC
SCNpilot_expt_500_bf_scaffold_1553_24
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22047..23204)
DNA (1158bp) protein (386aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182]
Lipid-A-disaccharide synthase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LF82_9PROT rbh
SCNpilot_expt_500_bf_scaffold_1553_25
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23201..24037)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036997B2
Uncharacterized protein {ECO:0000313|EMBL:AIL13410.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K09949 hypothetical protein
SCNpilot_expt_500_bf_scaffold_1553_26
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24024..24857)
DNA (834bp) protein (278aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00001267};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZTW6_9PROT
SCNpilot_expt_500_bf_scaffold_1553_27
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24857..25321)
DNA (465bp) protein (155aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (EC:4.2.1.-); K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISU0_RHOCS
SCNpilot_expt_500_bf_scaffold_1553_28
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25314..26363)
DNA (1050bp) protein (350aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] rbh
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B6277E rbh
Displaying 28 items

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