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SCNpilot_expt_500_bf_scaffold_1690

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1690_1
unknown

Not on your lists

1..585
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B4B1
SCNpilot_expt_500_bf_scaffold_1690_2
unknown

Not on your lists

717..1019
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1690_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1083..2987)
DNA (1905bp) protein (635aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] rbh
Acetyl-coenzyme A synthetase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0W0_9PROT
SCNpilot_expt_500_bf_scaffold_1690_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3267..3569)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12750.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1690_5
unknown

Not on your lists

4246..5661
DNA (1416bp) protein (472aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1690_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5731..6576)
DNA (846bp) protein (282aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;"
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] rbh
2-dehydro-3-deoxyphosphooctonate aldolase id=4025025 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
SCNpilot_expt_500_bf_scaffold_1690_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6573..6962)
DNA (390bp) protein (130aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
pyrG; CTP synthetase; K01937 CTP synthase [EC:6.3.4.2]
CTP synthase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0D0_9PROT
SCNpilot_expt_500_bf_scaffold_1690_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6965..8188)
DNA (1224bp) protein (408aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
CTP synthetase n=1 Tax=Gluconobacter frateurii RepID=UPI00029AE459
protein PyrG
SCNpilot_expt_500_bf_scaffold_1690_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8207..8590)
DNA (384bp) protein (128aa)
SecG protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NUC8_AZOS1
SecG protein; K03075 preprotein translocase subunit SecG
SecG protein {ECO:0000313|EMBL:BAI72007.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_expt_500_bf_scaffold_1690_10
unknown

Not on your lists

9005..10546
DNA (1542bp) protein (514aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1690_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10602..11348)
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
Triosephosphate isomerase n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FV76_PHAMO
SCNpilot_expt_500_bf_scaffold_1690_12
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11345..12826)
DNA (1482bp) protein (494aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
metG; methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionine--tRNA ligase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LUM5_9PROT rbh
SCNpilot_expt_500_bf_scaffold_1690_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12965..13966)
DNA (1002bp) protein (334aa)
ABC transporter periplasmic substrate-binding protein n=2 Tax=Brucella RepID=E0DZI1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AIL12744.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ABC transporter periplasmic substrate-binding protein; K01989 putative ABC transport system substrate-binding protein
SCNpilot_expt_500_bf_scaffold_1690_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14204..16117
DNA (1914bp) protein (638aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] rbh
Threonine--tRNA ligase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GRC1_9PROT rbh
SCNpilot_expt_500_bf_scaffold_1690_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16264..16701
DNA (438bp) protein (146aa)
Translation initiation factor IF-3 n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HGC6_9PROT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3
SCNpilot_expt_500_bf_scaffold_1690_16
unknown

Not on your lists

comp(16784..17494)
DNA (711bp) protein (237aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1690_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17702..18163)
DNA (462bp) protein (154aa)
Outer membrane protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=Q6N0C6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL12741.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
OmpA/MotB protein; K03640 peptidoglycan-associated lipoprotein
SCNpilot_expt_500_bf_scaffold_1690_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18239..19561)
DNA (1323bp) protein (441aa)
translocation protein TolB n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6CCA9
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
tolB; translocation protein TolB; K03641 TolB protein
SCNpilot_expt_500_bf_scaffold_1690_19
unknown

Not on your lists

comp(19720..20244)
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1690_20
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20476..20697)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13564.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1690_21
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21261..22904)
DNA (1644bp) protein (548aa)
Predicted protein n=1 Tax=Streptomyces sp. C RepID=D9W4K2_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL19830.1}; TaxID=253839 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
SCNpilot_expt_500_bf_scaffold_1690_22
unknown

Not on your lists

comp(22992..23306)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1690_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23366..23734)
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12739.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1690_24
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23838..24677)
DNA (840bp) protein (280aa)
Periplasmic protein TolA, links inner and outer membranes n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FNV1_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:AIL12738.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
periplasmic protein TonB
SCNpilot_expt_500_bf_scaffold_1690_25
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24693..25181)
DNA (489bp) protein (163aa)
Protein TolR n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVI4_9PROT
Protein TolR {ECO:0000313|EMBL:EHM03057.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
tolR; biopolymer transporter; K03560 biopolymer transport protein TolR
SCNpilot_expt_500_bf_scaffold_1690_26
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25182..25910)
DNA (729bp) protein (243aa)
TolQ protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EXR7_9PROT rbh
Biopolymer transporter ExbB {ECO:0000313|EMBL:AIL12737.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
biopolymer transport protein; K03562 biopolymer transport protein TolQ rbh
SCNpilot_expt_500_bf_scaffold_1690_27
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25929..26336)
DNA (408bp) protein (136aa)
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
hypothetical protein n=1 Tax=Loktanella hongkongensis RepID=UPI0003604AA0
Uncharacterized protein {ECO:0000313|EMBL:AIL12736.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1690_28
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26624..27622
DNA (999bp) protein (333aa)
glycosyl transferase family protein; K02843 heptosyltransferase II [EC:2.4.-.-]
Glycosyl transferase, family 9 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN14_9PROT
Glycosyl transferase, family 9 {ECO:0000313|EMBL:EDP65962.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
SCNpilot_expt_500_bf_scaffold_1690_29
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27785..28465
DNA (681bp) protein (227aa)
Glycosyl transferase family 9 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0U8_NITHN
Glycosyl transferase family 9 {ECO:0000313|EMBL:CDH44094.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
glycosyl transferase family protein
SCNpilot_expt_500_bf_scaffold_1690_30
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28787..29104
DNA (318bp) protein (106aa)
Protein ApaG n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0Y2_9PROT
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
apaG; ApaG protein; K06195 ApaG protein
Displaying items 1-30 of 32 in total

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