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SCNpilot_expt_500_bf_scaffold_1802

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1802_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..251
DNA (249bp) protein (83aa)
Tn21 family resolvase n=1 Tax=uncultured bacterium RepID=G9FA21_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL13772.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
resolvase
SCNpilot_expt_500_bf_scaffold_1802_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(339..575)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETV8_AMOA5
Membrane protein {ECO:0000313|EMBL:AIL13885.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K09779 hypothetical protein
SCNpilot_expt_500_bf_scaffold_1802_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(773..1297)
DNA (525bp) protein (175aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B738
PAS/PAC sensor signal transduction histidine kinase
SCNpilot_expt_500_bf_scaffold_1802_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1392..1829)
DNA (438bp) protein (146aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
histidine kinase n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI00024845FF
PAS/PAC sensor signal transduction histidine kinase
SCNpilot_expt_500_bf_scaffold_1802_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2073..2327
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13633.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1802_6
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3056..4033
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QMG9_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EGF91410.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
hypothetical protein; K07086
SCNpilot_expt_500_bf_scaffold_1802_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4637..5482
DNA (846bp) protein (282aa)
Transcriptional regulator, LysR family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QHZ2_SPILD rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADB36880.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_expt_500_bf_scaffold_1802_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5826..6173
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU25_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06727.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_expt_500_bf_scaffold_1802_9
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6281..6979
DNA (699bp) protein (233aa)
Uncharacterized protein n=5 Tax=Legionella pneumophila RepID=Q5X8G2_LEGPA
hypothetical protein
2-(S)-hydroxypropyl-CoM dehydrogenase {ECO:0000313|EMBL:GAN25366.1}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
SCNpilot_expt_500_bf_scaffold_1802_10
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6976..7215
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B62DBD
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
SCNpilot_expt_500_bf_scaffold_1802_11
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7297..7809
DNA (513bp) protein (171aa)
tryptophan-rich sensory protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ABD5
integral membrane protein; K07185 tryptophan-rich sensory protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
SCNpilot_expt_500_bf_scaffold_1802_12
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7973..8527)
DNA (555bp) protein (185aa)
Protein related to deoxyribodipyrimidine photolyase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VH40_9PROT
Protein related to deoxyribodipyrimidine photolyase
Protein related to deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AGH98702.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
SCNpilot_expt_500_bf_scaffold_1802_13
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8514..9095)
DNA (582bp) protein (194aa)
Protein related to deoxyribodipyrimidine photolyase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VH40_9PROT
Protein related to deoxyribodipyrimidine photolyase
Protein related to deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AGH98702.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
SCNpilot_expt_500_bf_scaffold_1802_14
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9137..9481)
DNA (345bp) protein (115aa)
Protein related to deoxyribodipyrimidine photolyase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VH40_9PROT
Protein related to deoxyribodipyrimidine photolyase
Protein related to deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AGH98702.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
SCNpilot_expt_500_bf_scaffold_1802_15
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9478..10044)
DNA (567bp) protein (189aa)
Glutathione peroxidase (EC:1.11.1.9)
Glutathione peroxidase n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VHL6_9PROT
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
SCNpilot_expt_500_bf_scaffold_1802_16
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10131..11006)
DNA (876bp) protein (292aa)
Transposase n=1 Tax=uncultured delta proteobacterium RepID=Q2YZQ9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AIL13527.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
integrase
SCNpilot_expt_500_bf_scaffold_1802_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11003..11320)
DNA (318bp) protein (106aa)
Transposase IS3/IS911 family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBF8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:AIL13807.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transposase IS3/IS911; K07483 transposase
SCNpilot_expt_500_bf_scaffold_1802_18
unknown

Not on your lists

11618..11884
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1802_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12000..12170)
DNA (171bp) protein (57aa)
Transposase {ECO:0000313|EMBL:AIL12427.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1802_20
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12209..12658)
DNA (450bp) protein (150aa)
transposase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B94A
Transposase {ECO:0000313|EMBL:AIL12427.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative transposase
SCNpilot_expt_500_bf_scaffold_1802_21
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12800..13318)
DNA (519bp) protein (173aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13320.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1802_22
unknown

Not on your lists

comp(13380..14039)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1802_23
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14303..15472
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225C1BA
Uncharacterized protein {ECO:0000313|EMBL:AIK96182.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1802_24
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15684..16283)
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13803.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1802_25
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16592..17089)
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12839.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_1802_26
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17596..18573
DNA (978bp) protein (326aa)
Transposase n=6 Tax=Wolbachia RepID=C0R2R2_WOLWR
Uncharacterized protein {ECO:0000313|EMBL:AIL13782.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transposase
SCNpilot_expt_500_bf_scaffold_1802_27
unknown

Not on your lists

comp(18627..20294)
DNA (1668bp) protein (556aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1802_28
unknown

Not on your lists

comp(20664..21602)
DNA (939bp) protein (313aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1802_29
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21644..22093)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PL27_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ86130.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
hemerythrin hhe cation binding domain-containing protein
SCNpilot_expt_500_bf_scaffold_1802_30
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22140..22658)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11TD3_CYTH3
Uncharacterized protein {ECO:0000313|EMBL:AIL12808.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
Displaying items 1-30 of 46 in total

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