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SCNpilot_expt_500_bf_scaffold_6121

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6121_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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139..675
DNA (537bp) protein (179aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13426.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_6121_2

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672..1871
DNA (1200bp) protein (400aa)
putative conjugative transfer protein TraB n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACDF
TraB pilus assembly {ECO:0000313|EMBL:EKE08829.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
F pilus assembly protein TraB; K12065 conjugal transfer pilus assembly protein TraB
SCNpilot_expt_500_bf_scaffold_6121_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1868..2197
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12622.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_6121_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2197..4695
DNA (2499bp) protein (833aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12621.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
putative inner-membrane protein traC id=4756796 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
traC; inner-membrane protein traC; K12063 conjugal transfer ATP-binding protein TraC
SCNpilot_expt_500_bf_scaffold_6121_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4692..5033
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12620.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_6121_6
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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5030..5530
DNA (501bp) protein (167aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
Type IV secretory pathway protease TraF-like protein n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DBS5_9GAMM
traF; F pilus assembly protein traF; K12062 conjugal transfer pilin signal peptidase TrbI
SCNpilot_expt_500_bf_scaffold_6121_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6114..6428
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13430.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_6121_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6425..6691
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13431.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_6121_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6695..7138
DNA (444bp) protein (148aa)
conjugal transfer protein TraU n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225ACE7
Conjugal transfer protein {ECO:0000313|EMBL:AIL13432.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
TraU protein; K12060 conjugal transfer pilus assembly protein TraU
Displaying 9 items

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