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SCNpilot_expt_500_bf_scaffold_6284

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6284_1
unknown

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comp(434..1471)
DNA (1038bp) protein (346aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_6284_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1718..2674)
DNA (957bp) protein (319aa)
protein chain release factor B (EC:3.1.1.29); K02836 peptide chain release factor 2
peptide chain release factor 2 n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AC29 rbh
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_6284_3
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2927..5233)
DNA (2307bp) protein (769aa)
peptidoglycan glycosyltransferase (penicillin-binding protein 1A); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
Penicillin-binding protein 1A n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MJY0_9PROT
Penicillin-binding protein 1A {ECO:0000313|EMBL:KJB97343.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
SCNpilot_expt_500_bf_scaffold_6284_4

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comp(5469..6821)
DNA (1353bp) protein (451aa)
30S ribosomal protein S1 n=1 Tax=uncultured bacterium RepID=K2DVD0_9BACT
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
SCNpilot_expt_500_bf_scaffold_6284_5
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6769..7278)
DNA (510bp) protein (170aa)
30S ribosomal protein S1 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A8S4_9PROT
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
SCNpilot_expt_500_bf_scaffold_6284_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7333..7980)
DNA (648bp) protein (216aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase n=1 Tax=uncultured bacterium RepID=K2EJQ3_9BACT
SCNpilot_expt_500_bf_scaffold_6284_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8075..8443
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RXP4_RHORT
Uncharacterized protein {ECO:0000313|EMBL:AIL12929.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6284_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8666..9703
DNA (1038bp) protein (346aa)
wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA (EC:2.7.8.-)
Uncharacterized protein {ECO:0000313|EMBL:AIL12928.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
WecA: putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase id=3202357 bin=GWA1_Alphaproteobacteria_45_9 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
SCNpilot_expt_500_bf_scaffold_6284_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9714..10445
DNA (732bp) protein (244aa)
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ABC transporter-like protein; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-]
ABC transporter related n=1 Tax=Marinomonas sp. (strain MWYL1) RepID=A6VS05_MARMS
SCNpilot_expt_500_bf_scaffold_6284_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10438..11241
DNA (804bp) protein (268aa)
High-affinity zinc transporter membrane component n=1 Tax=Pasteurella bettyae CCUG 2042 RepID=I3DEH7_9PAST
Uncharacterized protein {ECO:0000313|EMBL:AIL12926.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
high-affinity zinc transporter membrane protein; K09816 zinc transport system permease protein
SCNpilot_expt_500_bf_scaffold_6284_11
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11232..11633
DNA (402bp) protein (134aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19); K04765 ATP diphosphatase [EC:3.6.1.8]
MazG family protein n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2J7B6_9PSED
MazG family protein {ECO:0000313|EMBL:ENA31856.1}; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. HPB0071.;"
Displaying 11 items

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