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SCNpilot_expt_500_bf_scaffold_5407

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5407_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..671)
DNA (669bp) protein (223aa)
peptidase S1C, Do; K01362 [EC:3.4.21.-]
Peptidase S1C, Do n=2 Tax=Rhodospirillum rubrum RepID=G2TDA3_RHORU
Uncharacterized protein {ECO:0000313|EMBL:AIL13108.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_5407_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(682..1557)
DNA (876bp) protein (292aa)
hflC; HflC protein; K04087 membrane protease subunit HflC [EC:3.4.-.-]
Protein HflC n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INV6_RHOCS
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_5407_3
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1554..2660)
DNA (1107bp) protein (369aa)
hflK; HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-]
membrane protein n=1 Tax=Pelagibacter ubique RepID=UPI0003B39F8B
HflK protein, putative {ECO:0000313|EMBL:ACI99377.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_expt_500_bf_scaffold_5407_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2803..3270)
DNA (468bp) protein (156aa)
Thiol peroxidase2C Bcp-type n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KFB9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AIL13106.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
bcp; thiol peroxidase, thioredoxin-dependent
SCNpilot_expt_500_bf_scaffold_5407_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3327..5411
DNA (2085bp) protein (695aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INC8_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:AIL13105.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5407_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5413..6477
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI00037C4CCD
Uncharacterized protein {ECO:0000313|EMBL:AIL13105.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5407_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6481..7125
DNA (645bp) protein (215aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4]
Ribonuclease HII n=2 Tax=Magnetospirillum RepID=M2ZUZ5_9PROT
SCNpilot_expt_500_bf_scaffold_5407_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7172..8308)
DNA (1137bp) protein (379aa)
Patatin n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPQ4_9BACT rbh
Patatin {ECO:0000313|EMBL:EEF58177.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Patatin rbh
SCNpilot_expt_500_bf_scaffold_5407_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8383..8517)
DNA (135bp) protein (45aa)
Metallophosphoesterase {ECO:0000313|EMBL:AIL13103.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Displaying 9 items

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