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SCNpilot_expt_500_bf_scaffold_3265

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3265_1
R_Gammaproteobacteria_40_19, Gammaproteobacteria, Proteobacteria, Bacteria

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3..2126
DNA (2124bp) protein (708aa)
Transposase Tn3 family protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZEI0_ANACC
transposase Tn3 family protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_40_19_curated
SCNpilot_expt_500_bf_scaffold_3265_2
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2221..3252
DNA (1032bp) protein (344aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZWN7_METMM
Transposase {ECO:0000313|EMBL:AIK96211.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
transposase IS116/IS110/IS902 family protein
SCNpilot_expt_500_bf_scaffold_3265_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3569..3784)
DNA (216bp) protein (72aa)
Resolvase, N-terminal domain protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AN29_PELPD
Uncharacterized protein {ECO:0000313|EMBL:AIL13772.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
resolvase domain-containing protein
SCNpilot_expt_500_bf_scaffold_3265_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3802..4806
DNA (1005bp) protein (335aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VW48_POLNA
Transposase {ECO:0000313|EMBL:AIL13840.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transposase IS116/IS110/IS902 family protein; K07486 transposase
SCNpilot_expt_500_bf_scaffold_3265_5
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(5101..5928)
DNA (828bp) protein (276aa)
Integrase catalytic region n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I211_CLOCE
Putative transposase OrfB {ECO:0000313|EMBL:CDZ80324.1}; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia sp. 'Rubis'.;"
integrase
SCNpilot_expt_500_bf_scaffold_3265_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6072..6269)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13859.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_3265_7
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6540..7802)
DNA (1263bp) protein (421aa)
Predicted protein n=1 Tax=Streptomyces sp. C RepID=D9W4Q0_9ACTO rbh
Predicted protein {ECO:0000313|EMBL:EFL19878.1}; TaxID=253839 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
type 11 methyltransferase
SCNpilot_expt_500_bf_scaffold_3265_8
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

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comp(7859..9223)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI000248446A rbh
Uncharacterized protein {ECO:0000313|EMBL:KIF23477.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3265_9
Bacillus sp. BS-02, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9400..10233)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Bacillus sp. BS-02 RepID=E2JA17_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ADN44272.1}; TaxID=887059 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. BS-02.;"
adenine-specific DNA methylase
SCNpilot_expt_500_bf_scaffold_3265_10
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10267..10893)
DNA (627bp) protein (209aa)
LOG family protein YvdD {ECO:0000313|EMBL:KFF05457.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
Putative uncharacterized protein id=4363267 bin=GWF2_Bacteroidetes_40_14 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein; K06966
SCNpilot_expt_500_bf_scaffold_3265_11
Listeria seeligeri, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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12060..12764
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Listeria seeligeri FSL S4-171 RepID=E3ZZB5_LISSE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EFS00150.1}; TaxID=702453 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria seeligeri FSL N1-067.;"
SCNpilot_expt_500_bf_scaffold_3265_12
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

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12818..13597
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JAX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY45982.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
SCNpilot_expt_500_bf_scaffold_3265_13
Orientia tsutsugamushi, Orientia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14223..14711
DNA (489bp) protein (163aa)
ABC transporter permease/ATP-binding protein n=1 Tax=Orientia tsutsugamushi (strain Ikeda) RepID=B3CRJ0_ORITI
ABC transporter permease/ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial
ABC transporter family protein {ECO:0000313|EMBL:KJV56954.1}; TaxID=1359186 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Orientia.;" source="Orientia tsutsugamushi str. Kato PP.;"
SCNpilot_expt_500_bf_scaffold_3265_14
Orientia tsutsugamushi, Orientia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14842..16014
DNA (1173bp) protein (391aa)
ABC transporter permease/ATP-binding protein n=1 Tax=Orientia tsutsugamushi (strain Ikeda) RepID=B3CRJ0_ORITI rbh
ABC transporter family protein {ECO:0000313|EMBL:KJV56954.1}; TaxID=1359186 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Orientia.;" source="Orientia tsutsugamushi str. Kato PP.;"
ABC transporter permease/ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial rbh
Displaying 14 items

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