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SCNpilot_expt_500_bf_scaffold_4921

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4921_1

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comp(3..245)
DNA (243bp) protein (81aa)
hypothetical protein COdytL_06467 id=4886490 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Uncharacterized protein {ECO:0000313|EMBL:EKE09731.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4921_2
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

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365..1456
DNA (1092bp) protein (364aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KRI5_MICAA
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEP09547.1}; TaxID=856793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
SCNpilot_expt_500_bf_scaffold_4921_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1453..1902
DNA (450bp) protein (150aa)
Acriflavin resistance protein n=1 Tax=Thauera sp. 63 RepID=N6XI31_9RHOO
Multidrug transporter AcrB {ECO:0000313|EMBL:AIL13361.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
cation/multidrug efflux pump protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_expt_500_bf_scaffold_4921_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1968..4460
DNA (2493bp) protein (831aa)
Acriflavin resistance protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GX52_9PROT
Multidrug transporter AcrB {ECO:0000313|EMBL:AIL13361.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
multidrug efflux transporter
SCNpilot_expt_500_bf_scaffold_4921_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4540..4968
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13362.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
id=5041844 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SCNpilot_expt_500_bf_scaffold_4921_6

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comp(5012..6670)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EUU3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE09474.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
type II and III secretion system protein; K02453 general secretion pathway protein D
SCNpilot_expt_500_bf_scaffold_4921_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6759..7463
DNA (705bp) protein (235aa)
type IV prepilin leader peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
Leader peptidase (Prepilin peptidase) / N-methyltransferase n=1 Tax=Eubacterium sp. CAG:252 RepID=R6JZT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AIL13363.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_4921_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7498..7605)
DNA (108bp) protein (36aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13364.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Displaying 8 items

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