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SCNpilot_expt_500_bf_scaffold_2753

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2753_1
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..793)
DNA (792bp) protein (264aa)
S-layer protein RsaA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCN7_PHEZH
rsaA; S-layer protein
S-layer protein RsaA {ECO:0000313|EMBL:ACG78224.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_expt_500_bf_scaffold_2753_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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961..1410
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EWA2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL13112.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transcriptional regulator; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
SCNpilot_expt_500_bf_scaffold_2753_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1407..2588
DNA (1182bp) protein (394aa)
cysteine sulfinate desulfinase/cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7]
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036FA4F0 rbh
Uncharacterized protein {ECO:0000313|EMBL:AIL13113.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_2753_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2569..3807
DNA (1239bp) protein (413aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
cysteine sulfinate desulfinase/cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7] rbh
cysteine desulfurase id=2997696 bin=GWA1_Alphaproteobacteria_45_9 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small rbh
SCNpilot_expt_500_bf_scaffold_2753_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3818..4213
DNA (396bp) protein (132aa)
NifU family protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IR06_BORPD
Scaffolding protein {ECO:0000313|EMBL:AIL13115.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
nifU; scaffold protein; K04488 nitrogen fixation protein NifU and related proteins
SCNpilot_expt_500_bf_scaffold_2753_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4203..4547
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z3S2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL13116.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K13628 iron-sulfur cluster assembly protein
SCNpilot_expt_500_bf_scaffold_2753_7
Idiomarina salinarum, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4540..5043
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI0003787852
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=435908 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina salinarum.;"
hscB; co-chaperone HscB; K04082 molecular chaperone HscB
SCNpilot_expt_500_bf_scaffold_2753_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5051..6820
DNA (1770bp) protein (590aa)
Chaperone protein HscA homolog n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2U7_MAGSA
Uncharacterized protein {ECO:0000313|EMBL:AIL13117.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hscA; chaperone protein HscA; K04044 molecular chaperone HscA
SCNpilot_expt_500_bf_scaffold_2753_9
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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6887..7312
DNA (426bp) protein (142aa)
Sulfurtransferase id=2963731 bin=GWF2_Lentisphaerae_57_35 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
rhodanese domain-containing protein
Tax=GWF2_Lentisphaerae_57_35_curated
SCNpilot_expt_500_bf_scaffold_2753_10
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

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comp(7672..8991)
DNA (1320bp) protein (440aa)
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E0F7_HORVD
Predicted protein {ECO:0000313|EMBL:BAK00829.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
SCNpilot_expt_500_bf_scaffold_2753_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9658..10017
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13119.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_2753_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10020..12335
DNA (2316bp) protein (772aa)
Malic enzyme {ECO:0000313|EMBL:AIL13120.1}; EC=1.1.1.40 {ECO:0000313|EMBL:AIL13120.1};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
dme; malic enzyme (EC:1.1.1.39); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] rbh
NAD-dependent malic enzyme n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQV9_RHOCS rbh
SCNpilot_expt_500_bf_scaffold_2753_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12338..13726
DNA (1389bp) protein (463aa)
divalent cation transporter (EC:3.6.1.-); K06213 magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Putative magnesium transporter, MgtE-like id=3710854 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
SCNpilot_expt_500_bf_scaffold_2753_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13768..14955
DNA (1188bp) protein (396aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AIL13122.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AIL13122.1};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
atoB; acetyl-CoA C-acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA C-acetyltransferase n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9ATG8_BURM1
SCNpilot_expt_500_bf_scaffold_2753_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14955..15785
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T839_BURSG
Uncharacterized protein {ECO:0000313|EMBL:AIL13123.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein; K15268 O-acetylserine/cysteine efflux transporter
Displaying 15 items

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