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SCNpilot_expt_500_bf_scaffold_2015_23

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 19433..20032

Top 3 Functional Annotations

Value Algorithm Source
Protein GrpE n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVK0_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 176.0
  • Bit_score: 178
  • Evalue 8.90e-42
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 199.0
  • Bit_score: 314
  • Evalue 1.10e-82
grpE; co-chaperone GrpE; K03687 molecular chaperone GrpE similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 176.0
  • Bit_score: 178
  • Evalue 2.80e-42

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGAACCAAGAACATAAGAAAACTGACGCACCAGAACTCCCTCAAGAGGAGACTCCTACCACTCCAGGAAACGTTTCCTCTGGACAGAATGAAGAAATCACAGATGAAAATACGCCAGAAATTTCTTCCCAGTCTTCAACAGAGGAAGAGATAAATCTTCTAAAAGATCAACTTTTGCGTGCGTTAGCCGAAAGTGAGAACATTCGTAGAAGAGCCCAGCGTGAAAAAGAAGATGCCTCTCGTTTTGCGATTGCTAACTTTGCGCGAGATCTTTTAACCGTTGCAGATAATTTAACGCGTGCTCTTGAGAATATTCCGGCTGAAAAATTAGAAGCAAATGATGCCCTCAAATCTCTTCTAGAAGGAATCCAAATTACCGAACGTGAACTTAACAATGCCCTTGAGCGTAATGGTATAAAGAAAATATCTCCTTTGGGAGAGCTTTTTGATCATAATTATCATCAAGCTATGCTTGAAGAAGAAACTGACGAACATCAACCTGGACACGTCATGCGTGTTTTACAGACAGGCTATGTGTTGAATGAGAGACTCTTGCGCCCAGCACTTGTTGGAGTTGCCAAAGCAAAATCATCTACCTGA
PROTEIN sequence
Length: 200
MNQEHKKTDAPELPQEETPTTPGNVSSGQNEEITDENTPEISSQSSTEEEINLLKDQLLRALAESENIRRRAQREKEDASRFAIANFARDLLTVADNLTRALENIPAEKLEANDALKSLLEGIQITERELNNALERNGIKKISPLGELFDHNYHQAMLEEETDEHQPGHVMRVLQTGYVLNERLLRPALVGVAKAKSST*