ggKbase home page

SCNpilot_expt_500_bf_scaffold_3240_10

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(8835..9470)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 212.0
  • Bit_score: 305
  • Evalue 5.50e-80
Cytochrome c oxidase subunit 2 n=1 Tax=Oceanibaculum indicum P24 RepID=K2KEP6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 212.0
  • Bit_score: 288
  • Evalue 6.50e-75
coxB; cytochrome c oxidase, subunit II similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 212.0
  • Bit_score: 279
  • Evalue 1.20e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGCTGCTTGTTGTCATTGCATGTGTTGCGTTGGCTGTTCTTTTTCTTCTACTTTATGTTGTCTTGAGGTTTCGTGCTAAAAGGAATCCTGTTCCTTCAAAAACAACCCATAATCCTATTCTTGAAGTTGTATGGACTTTAATCCCCGCGATCATTCTTTTAGGAATTGCTTTTCCTTCATTTAAGTTACTTTATTTTATGGATAGGACCCATGAGCCTGAAATGAGTCTTAAGGTTACAGGACATCAATGGTATTGGAGTTATGAATATCCAGAAGAAAAAATAGCTTTTGATAGTTATATGATTCAAGATGCAGATTTAAAACCAGGCCAACAAAGATTGCTTGAGGTTGATCATGAAATTGTTGTTCCAATTGAAACAAATATTCGTATTTTAGTCACCTCTGCAGATGTGCTTCATAGTTGGGCGATGCCTGCATTGGGAATCAAGCAAGATACTATTCCAGGTCGACTTCGAGAAACCTGGATGCGCATTTTGAAAAAAGGAACTTATTATGGTCAGTGTTCTGAGCTTTGTGGCGTAAATCACGCCTTTATGCCAATCAAAATTAGGGCAGTCTCTAAGCAAGAATATGAACAATGGCTTCATGAAGCAAAACAGAAATTTGCATCCTAG
PROTEIN sequence
Length: 212
MLLVVIACVALAVLFLLLYVVLRFRAKRNPVPSKTTHNPILEVVWTLIPAIILLGIAFPSFKLLYFMDRTHEPEMSLKVTGHQWYWSYEYPEEKIAFDSYMIQDADLKPGQQRLLEVDHEIVVPIETNIRILVTSADVLHSWAMPALGIKQDTIPGRLRETWMRILKKGTYYGQCSELCGVNHAFMPIKIRAVSKQEYEQWLHEAKQKFAS*