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SCNpilot_expt_500_bf_scaffold_3240_12

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 11373..12134

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein radc n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNV7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 221.0
  • Bit_score: 251
  • Evalue 1.00e-63
Uncharacterized protein {ECO:0000313|EMBL:AIL12351.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 226.0
  • Bit_score: 429
  • Evalue 3.00e-117
radC; DNA repair protein RadC; K03630 DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 224.0
  • Bit_score: 243
  • Evalue 5.30e-62

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
GTGCTGTTTTTCAGCTTTATATTTTCGATTGTCGCTTTTTTGGTTAAGATAAAACAAGAAAAAAATGAAAGGGAGAATTTCTTGGCACTTAAAGAGCATTATGAAGGACATCGTGCTCGTCTTCGAGAGAGATTCCTTAAAGGAGGAGGCGATGCCCTTGCTGATTATGAACTCTTGGAGCTCATTTTATACGCGGCCCATCCTCGTGGTGATGTCAAACCTCTCGCCAAAGAGCTTCTAATGACCTTTAAAACATTTCCCCAAATTTTAAGTGCTGATACCCAAGACCTTTTAAAAGTAAAAGGTGTAGGAAGTGCTGTAGTTGCAGCGCTTAAAGTTGTCCAGGTCTCCGTAGAACGATGCCTTAAGGCTGAGATCTTACAACGACCCGTTTTAAAATCATGGCCACAGATTTTAAGTTATTGTGAAATCGCAATGCGTGATCTTAAGTATGAGCAGTTACGATTGCTTTTTCTTGATCGCCAAAATAACTTGATTGCCGATGAAGTTCAGCAAAATGGAACGGTTGATCAAGCAACCATTTATACACGTGAGATTGTTAAAAGAGCTCTTGAATTAGGGGCCTCAGGCCTGATCCTCGTGCATAACCATCCGAGTGGTGATCCAACCCCCTCCAATGCCGATATCGAAGCAACCTTCCGTATTAGAGAAGCTTCAGAGCGTCTTAGAATTAAGGTTTTTGACCATATTATTGTTGGCAAGGGACAATGTCGCTCATTAAGAAATGAGCGAATGATTTAA
PROTEIN sequence
Length: 254
VLFFSFIFSIVAFLVKIKQEKNERENFLALKEHYEGHRARLRERFLKGGGDALADYELLELILYAAHPRGDVKPLAKELLMTFKTFPQILSADTQDLLKVKGVGSAVVAALKVVQVSVERCLKAEILQRPVLKSWPQILSYCEIAMRDLKYEQLRLLFLDRQNNLIADEVQQNGTVDQATIYTREIVKRALELGASGLILVHNHPSGDPTPSNADIEATFRIREASERLRIKVFDHIIVGKGQCRSLRNERMI*