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SCNpilot_expt_500_bf_scaffold_6143

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6143_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(75..569)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AD3B4
Sphingomonas taxi strain 30a NODE_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26409.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6143_2
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(607..1248)
DNA (642bp) protein (214aa)
cell wall hydrolase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD046
hypothetical protein
Cell wall hydrolase, SleB {ECO:0000313|EMBL:EAT08994.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
SCNpilot_expt_500_bf_scaffold_6143_3
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1410..1739)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4FC82
Uncharacterized protein {ECO:0000313|EMBL:KHA64977.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6143_4
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1736..2059)
DNA (324bp) protein (108aa)
thioesterase n=1 Tax=Sphingomonas elodea RepID=UPI000263161F
Uncharacterized protein {ECO:0000313|EMBL:GAM01009.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6143_5
unknown

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2061..2669
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_6143_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2615..3199)
DNA (585bp) protein (195aa)
Ribosomal subunit interface protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WY81_9SPHN rbh
Sphingomonas taxi strain 30a NODE_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26443.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
30S ribosomal protein S30P
SCNpilot_expt_500_bf_scaffold_6143_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3255..3947)
DNA (693bp) protein (231aa)
DNA polymerase III, epsilon subunit n=1 Tax=Sphingomonas sp. S17 RepID=F3WY82_9SPHN rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:AIT07387.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
DNA polymerase III subunit epsilon rbh
SCNpilot_expt_500_bf_scaffold_6143_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3955..4548)
DNA (594bp) protein (198aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
coaE; dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24]
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000360036C
SCNpilot_expt_500_bf_scaffold_6143_9
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4545..5357)
DNA (813bp) protein (271aa)
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
Shikimate dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG67_9SPHN
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_expt_500_bf_scaffold_6143_10
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5354..5944)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003773785 rbh
Maf-like protein SP5_043_00400 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
maf protein; K06287 septum formation protein
SCNpilot_expt_500_bf_scaffold_6143_11
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5941..6771)
DNA (831bp) protein (277aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
PEP synthetase regulatory protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003725BDE
PEP synthetase regulatory protein rbh
Displaying 11 items

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