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SCNpilot_expt_500_bf_scaffold_6847

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6847_1
unknown

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comp(177..284)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_6847_2
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(377..805)
DNA (429bp) protein (143aa)
Transcriptional regulator, MarR family n=2 Tax=Sphingomonas wittichii RepID=A5VEY2_SPHWW
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABQ70848.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_expt_500_bf_scaffold_6847_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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886..2043
DNA (1158bp) protein (386aa)
multidrug ABC transporter permease n=2 Tax=Sphingomonas melonis RepID=UPI000375AF19 rbh
Multidrug ABC transporter permease {ECO:0000313|EMBL:AIT07958.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
secretion protein HlyD family protein; K03543 multidrug resistance protein A rbh
SCNpilot_expt_500_bf_scaffold_6847_4
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2040..3638
DNA (1599bp) protein (533aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VEY4_SPHWW rbh
DSBA oxidoreductase {ECO:0000313|EMBL:AJR23210.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B rbh
SCNpilot_expt_500_bf_scaffold_6847_5
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4553..5023
DNA (471bp) protein (157aa)
Outer membrane protein OprN n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z805_SPHJU
oprN; outer membrane protein OprN
Outer membrane protein OprN {ECO:0000313|EMBL:BAI98624.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCNpilot_expt_500_bf_scaffold_6847_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5004..5984)
DNA (981bp) protein (327aa)
transcriptional regulator n=1 Tax=Sphingomonas melonis RepID=UPI000370EF25
Transcriptional regulator {ECO:0000313|EMBL:AIT06895.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
XRE family transcriptional regulator
Displaying 6 items

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