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SCNpilot_expt_500_bf_scaffold_11088

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_11088_1
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1200)
DNA (1200bp) protein (400aa)
MFS transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD0F4 rbh
Multidrug resistance protein B {ECO:0000313|EMBL:EZP48786.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
major facilitator superfamily protein; K08169 MFS transporter, DHA2 family, multidrug resistance protein
SCNpilot_expt_500_bf_scaffold_11088_2
R_Brevundimonas_68_13, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1658..2824)
DNA (1167bp) protein (389aa)
Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
SCNpilot_expt_500_bf_scaffold_11088_3
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3385..3738
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036962C4
Uncharacterized protein {ECO:0000313|EMBL:GAM01700.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_11088_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3758..4300)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000374EA04
Uncharacterized protein {ECO:0000313|EMBL:AIT05653.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
17 kDa surface antigen
SCNpilot_expt_500_bf_scaffold_11088_5
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4401..5354)
DNA (954bp) protein (318aa)
Putative oxidoreductase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AKQ4_9CAUL rbh
Putative oxidoreductase {ECO:0000313|EMBL:GAD58289.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_500_bf_scaffold_11088_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5416..5700)
DNA (285bp) protein (95aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
uvrD; DNA helicase II; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
DNA helicase II n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000380CFD5
Displaying 6 items

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