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SCNpilot_expt_500_bf_scaffold_8094

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8094_1
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..867)
DNA (867bp) protein (289aa)
alpha-glucosidase; K15922 alpha-glucosidase [EC:3.2.1.20]
alpha-glucosidase n=1 Tax=Aureimonas ureilytica RepID=UPI00036EDFB0
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_expt_500_bf_scaffold_8094_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(857..2509)
DNA (1653bp) protein (551aa)
medium-chain-fatty-acid--CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1734D
3-methylmercaptopropionyl-CoA ligase {ECO:0000313|EMBL:GAO53411.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
SCNpilot_expt_500_bf_scaffold_8094_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2573..4828)
DNA (2256bp) protein (752aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002889CDF rbh
Outer membrane receptor protein {ECO:0000313|EMBL:AJA07757.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
TonB-dependent receptor rbh
SCNpilot_expt_500_bf_scaffold_8094_4
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5010..5879)
DNA (870bp) protein (290aa)
Regulator of octopine catabolism/uptake operon (LysR family) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AX80_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AJA07758.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
occR; regulator of octopine catabolism/uptake operon (LysR family)
SCNpilot_expt_500_bf_scaffold_8094_5
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5983..6618
DNA (636bp) protein (212aa)
phytanoyl-CoA dioxygenase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B54BB6
phytanoyl-CoA dioxygenase
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
Displaying 5 items

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