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SCNpilot_expt_500_bf_scaffold_8204

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8204_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..2394
DNA (2394bp) protein (798aa)
PutA protein {ECO:0000313|EMBL:KIU29581.1}; EC=1.2.1.88 {ECO:0000313|EMBL:KIU29581.1};; EC=1.5.5.2 {ECO:0000313|EMBL:KIU29581.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
putA; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (EC:1.5.99.8 1.5.1.12)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037C7D91
SCNpilot_expt_500_bf_scaffold_8204_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2627..3349
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7185C
Sphingomonas taxi strain 30a NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29012.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
peptidase M23B
SCNpilot_expt_500_bf_scaffold_8204_3
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3446..3601)
DNA (156bp) protein (52aa)
Major Facilitator Superfamily protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WT19_9SPHN
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:GAM01708.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
major facilitator transporter; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
SCNpilot_expt_500_bf_scaffold_8204_4
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3934..4725)
DNA (792bp) protein (264aa)
MFS transporter n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289420D
AmpG permease {ECO:0000313|EMBL:CCW15860.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
major facilitator superfamily protein; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
SCNpilot_expt_500_bf_scaffold_8204_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4964..6103
DNA (1140bp) protein (380aa)
ferredoxin n=1 Tax=Sphingomonas elodea RepID=UPI00026308A2 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO38491.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Rieske (2Fe-2S) domain-containing protein
SCNpilot_expt_500_bf_scaffold_8204_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6100..6948
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037087C5 rbh
citrate (pro-3S)-lyase rbh
Citrate (Pro-3S)-lyase {ECO:0000313|EMBL:AGH50376.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_expt_500_bf_scaffold_8204_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6980..8218)
DNA (1239bp) protein (413aa)
peptidase M20D, amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037EF9B0 rbh
Amidohydrolase {ECO:0000313|EMBL:AIT06372.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Displaying 7 items

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