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SCNpilot_expt_500_bf_scaffold_8542

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8542_1
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..2131
DNA (2130bp) protein (710aa)
TonB-dependent receptor, plug n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URA7_9SPHN
TonB-dependent receptor, plug; K02014 iron complex outermembrane recepter protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_expt_500_bf_scaffold_8542_2
unknown

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2248..3015
DNA (768bp) protein (256aa)

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SCNpilot_expt_500_bf_scaffold_8542_3
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3182..4408
DNA (1227bp) protein (409aa)
cystathionine beta-lyase; K01760 cystathionine beta-lyase [EC:4.4.1.8]
Cystathionine beta-lyase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQF1_SPHAL
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_expt_500_bf_scaffold_8542_4
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4454..5662
DNA (1209bp) protein (403aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01733 threonine synthase [EC:4.2.3.1] rbh
Threonine synthase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NM35_9FIRM rbh
Threonine synthase {ECO:0000313|EMBL:EGO62890.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
SCNpilot_expt_500_bf_scaffold_8542_5
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

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5659..6576
DNA (918bp) protein (306aa)
Amino acid transporter n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KFH9_9GAMM
Amino acid transporter {ECO:0000313|EMBL:EED32595.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
amino acid permease-associated protein
Displaying 5 items

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