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SCNpilot_expt_500_bf_scaffold_5214

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5214_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1728
DNA (1728bp) protein (576aa)
aldehyde oxidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B59C53 rbh
Sphingomonas taxi strain 30a NODE_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26516.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
isoquinoline 1-oxidoreductase
SCNpilot_expt_500_bf_scaffold_5214_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1725..2729
DNA (1005bp) protein (335aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
ferrochelatase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036B6C9A rbh
ferrochelatase rbh
SCNpilot_expt_500_bf_scaffold_5214_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2711..3406
DNA (696bp) protein (232aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100); K00023 acetoacetyl-CoA reductase [EC:1.1.1.36]
acetoacetyl-CoA reductase n=1 Tax=Sphingomonas melonis RepID=UPI000365315A
Sphingomonas taxi strain 30a NODE_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26514.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_expt_500_bf_scaffold_5214_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3601..6348
DNA (2748bp) protein (916aa)
PII uridylyl-transferase (EC:2.7.7.59) rbh
PII uridylyl-transferase n=1 Tax=Sphingomonas melonis RepID=UPI000366B4E6 rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_expt_500_bf_scaffold_5214_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6355..7653)
DNA (1299bp) protein (433aa)
ATP-dependent protease n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B666F4 rbh
ATP-dependent protease ATPase subunit HslU {ECO:0000256|SAAS:SAAS00089650}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU rbh
SCNpilot_expt_500_bf_scaffold_5214_6
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7672..8226)
DNA (555bp) protein (185aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hslV; ATP-dependent HslUV protease peptidase subunit HslV; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] rbh
peptidase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000373D2AF rbh
Displaying 6 items

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