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SCNpilot_expt_500_bf_scaffold_3927

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3927_1
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..869
DNA (867bp) protein (289aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
putative metallopeptidase (EC:3.4.24.-); K11749 regulator of sigma E protease [EC:3.4.24.-]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036E77A9
SCNpilot_expt_500_bf_scaffold_3927_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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988..3639
DNA (2652bp) protein (884aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036544A8 rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
surface antigen (D15) rbh
SCNpilot_expt_500_bf_scaffold_3927_3
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3639..4283
DNA (645bp) protein (215aa)
membrane protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B35332
Outer membrane family protein {ECO:0000313|EMBL:KHA62747.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
outer membrane chaperone Skp
SCNpilot_expt_500_bf_scaffold_3927_4
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4280..4762
DNA (483bp) protein (161aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT32
3-hydroxyacyl-ACP dehydratase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036F80B0
(3R)-hydroxymyristoyl-ACP dehydratase
SCNpilot_expt_500_bf_scaffold_3927_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4883..5113
DNA (231bp) protein (77aa)
50S ribosomal protein L31 n=1 Tax=Sphingomonas sp. S17 RepID=F3WVN8_9SPHN
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
SCNpilot_expt_500_bf_scaffold_3927_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5158..5493
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003633A81
Sphingomonas taxi strain 30a NODE_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29593.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
type IV pilus assembly PilZ
SCNpilot_expt_500_bf_scaffold_3927_7
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5600..6064)
DNA (465bp) protein (155aa)
heat-shock protein n=1 Tax=Sphingomonas melonis RepID=UPI0003710B04
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:EZP57014.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
ibpA; molecular chaperone IbpA; K04080 molecular chaperone IbpA
SCNpilot_expt_500_bf_scaffold_3927_8
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6273..6665
DNA (393bp) protein (131aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003609B3A
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAL99495.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
TonB-dependent receptor
Displaying 8 items

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