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SCNpilot_expt_500_bf_scaffold_10025

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_10025_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..555)
DNA (555bp) protein (185aa)
UPI0003CFDD5F related cluster n=1 Tax=unknown RepID=UPI0003CFDD5F
Uncharacterized protein {ECO:0000313|EMBL:GAO53487.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
SCNpilot_expt_500_bf_scaffold_10025_2
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(643..1977)
DNA (1335bp) protein (445aa)
UPI0003CFF970 related cluster n=1 Tax=unknown RepID=UPI0003CFF970 rbh
Major facilitator family transporter {ECO:0000313|EMBL:KGB56681.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
major facilitator superfamily transporter rbh
SCNpilot_expt_500_bf_scaffold_10025_3
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2073..2468)
DNA (396bp) protein (132aa)
Carboxymuconolactone decarboxylase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46S22_CUPPJ
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:KGB56682.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
carboxymuconolactone decarboxylase
SCNpilot_expt_500_bf_scaffold_10025_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2465..3061)
DNA (597bp) protein (199aa)
UPI0003CFC867 related cluster n=1 Tax=unknown RepID=UPI0003CFC867
Uncharacterized protein {ECO:0000313|EMBL:GAO53484.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10025_5
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3069..3395)
DNA (327bp) protein (109aa)
UPI0003CFFBE3 related cluster n=1 Tax=unknown RepID=UPI0003CFFBE3
3-keto-5-aminohexanoate cleavage enzyme {ECO:0000313|EMBL:KGB56683.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
Displaying 5 items

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