ggKbase home page

SCNpilot_expt_500_bf_scaffold_17517

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_17517_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..797)
DNA (795bp) protein (265aa)
molybdopterin molybdochelatase; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003724AB4
Molybdenum cofactor biosynthesis protein MoeA {ECO:0000313|EMBL:AJP71825.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_expt_500_bf_scaffold_17517_2
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

879..2264
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037F6C20 rbh
ribonuclease rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_expt_500_bf_scaffold_17517_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2268..2765)
DNA (498bp) protein (166aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
2''''-5'''' RNA ligase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B56951
hypothetical protein
SCNpilot_expt_500_bf_scaffold_17517_4
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2888..3637
DNA (750bp) protein (250aa)
Membrane protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J350_9SPHN rbh
Membrane protein {ECO:0000313|EMBL:EQB32391.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein; K06890 rbh
SCNpilot_expt_500_bf_scaffold_17517_5
unknown

Not on your lists

3773..4048
DNA (276bp) protein (92aa)
pilus assembly protein PilZ n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3FCC7
SCNpilot_expt_500_bf_scaffold_17517_6
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4214..5503
DNA (1290bp) protein (430aa)
bkdA1; 2-oxoisovalerate dehydrogenase alpha subunit (EC:1.2.4.4); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035D429E rbh
Branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit {ECO:0000313|EMBL:GAM00509.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
SCNpilot_expt_500_bf_scaffold_17517_7
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5503..5955
DNA (453bp) protein (151aa)
2-oxoisovalerate dehydrogenase subunit beta n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AD240
hypothetical protein
Branched-chain alpha-keto acid dehydrogenase E1 component beta subunit {ECO:0000313|EMBL:GAM00510.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
SCNpilot_expt_500_bf_scaffold_17517_8
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5952..6371
DNA (420bp) protein (140aa)
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.4); K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4]
2-oxoisovalerate dehydrogenase subunit beta n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AD240
Uncharacterized protein {ECO:0000313|EMBL:EZP52560.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
Displaying 8 items

View Taxonomy