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SCNpilot_expt_500_bf_scaffold_16593

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_16593_1
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..211
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035DEBEF
Amidohydrolase {ECO:0000313|EMBL:KKC26438.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_16593_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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244..1422
DNA (1179bp) protein (393aa)
von Willebrand factor A n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003778558 rbh
Sphingomonas taxi strain 30a NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29526.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein; K09989 hypothetical protein
SCNpilot_expt_500_bf_scaffold_16593_3
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2399..2542
DNA (144bp) protein (48aa)
lytic transglycosylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB2E
Lytic transglycosylase {ECO:0000313|EMBL:EQB32314.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
lytic murein transglycosylase
SCNpilot_expt_500_bf_scaffold_16593_4
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2526..3239
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J661_9SPHN
Rare lipoprotein A {ECO:0000313|EMBL:KFL46166.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
rare lipoprotein A; K03642 rare lipoprotein A
SCNpilot_expt_500_bf_scaffold_16593_5
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3249..4424
DNA (1176bp) protein (392aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] rbh
peptidase S11 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B74CAB rbh
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EZP48783.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
SCNpilot_expt_500_bf_scaffold_16593_6
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4421..4990
DNA (570bp) protein (190aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
tmk; dTMP kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9]
thymidylate kinase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD75F
SCNpilot_expt_500_bf_scaffold_16593_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5258..5863
DNA (606bp) protein (202aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA-directed DNA polymerase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB2A
HolB protein {ECO:0000313|EMBL:GAN12684.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_expt_500_bf_scaffold_16593_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5873..7126
DNA (1254bp) protein (418aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
methionyl-tRNA synthetase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B797A0
Displaying 8 items

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