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SCNpilot_expt_500_bf_scaffold_4039

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4039_1
Pseudomonas sp. GM84, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1127)
DNA (1125bp) protein (375aa)
Sugar phosphate permease n=1 Tax=Pseudomonas sp. GM84 RepID=J2Y0D9_9PSED rbh
Sugar phosphate permease {ECO:0000313|EMBL:EJN37032.1}; Flags: Precursor;; TaxID=1144340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM84.;"
Major facilitator protein rbh
SCNpilot_expt_500_bf_scaffold_4039_2
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1158..2447)
DNA (1290bp) protein (430aa)
guanine deaminase; K01487 guanine deaminase [EC:3.5.4.3]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003668AAB
Guanine deaminase {ECO:0000313|EMBL:EHL96687.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_expt_500_bf_scaffold_4039_3
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2794..4011)
DNA (1218bp) protein (406aa)
Myosin-crossreactive antigen n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1INC3_9BRAD
Myosin-crossreactive antigen {ECO:0000313|EMBL:ERF85410.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
myosin-cross-reactive antigen
SCNpilot_expt_500_bf_scaffold_4039_4
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4011..4463)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y0Y3_PARAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT09375.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_expt_500_bf_scaffold_4039_5
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4632..5414)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BBC9
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
SCNpilot_expt_500_bf_scaffold_4039_6
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5549..7984)
DNA (2436bp) protein (812aa)
MscS mechanosensitive ion channel n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IG13_9SPHN rbh
mechanosensitive ion channel protein MscS rbh
MscS mechanosensitive ion channel {ECO:0000313|EMBL:CCA93671.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_expt_500_bf_scaffold_4039_7
unknown

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comp(8052..8252)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4039_8
unknown

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8388..8948
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4039_9
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8989..9978
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036944BB rbh
Uncharacterized protein {ECO:0000313|EMBL:EJK80707.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_4039_10
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10702..11325
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTY3_9SPHN
DNA, contig: SP617 {ECO:0000313|EMBL:GAN13415.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4039_11
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11442..12224)
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KHA64468.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KHA64468.1};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
enoyl-CoA hydratase (EC:4.2.1.17) rbh
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003752F80 rbh
SCNpilot_expt_500_bf_scaffold_4039_12
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12326..12778
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F780E
Phenylacetic acid degradation protein {ECO:0000313|EMBL:KHA64467.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
phenylacetic acid degradation-like protein
SCNpilot_expt_500_bf_scaffold_4039_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12775..13158
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C6174
Sphingomonas taxi strain 30a NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29391.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
phenylacetic acid degradation-like protein
SCNpilot_expt_500_bf_scaffold_4039_14
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13208..13855)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B74075 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHA63861.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4039_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13974..14558)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037D113E
Sphingomonas taxi strain 30a NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28045.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
Displaying 15 items

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